Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_16470 and PS417_16475 are separated by 16 nucleotides PS417_16475 and PS417_16480 overlap by 1 nucleotides PS417_16480 and PS417_16485 are separated by 10 nucleotides PS417_16485 and PS417_16490 are separated by 54 nucleotides
PS417_16470: PS417_16470 - seryl-tRNA synthetase, at 3,597,703 to 3,598,983
_16470
PS417_16475: PS417_16475 - camphor resistance protein CrcB, at 3,599,000 to 3,599,374
_16475
PS417_16480: PS417_16480 - recombination factor protein RarA, at 3,599,374 to 3,600,696
_16480
PS417_16485: PS417_16485 - membrane protein, at 3,600,707 to 3,601,330
_16485
PS417_16490: PS417_16490 - cell division protein FtsK, at 3,601,385 to 3,603,793
_16490
Position (kb) 3599
3600
3601 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 3599.151 kb on - strand, within PS417_16475 at 3599.218 kb on - strand, within PS417_16475 at 3599.218 kb on - strand, within PS417_16475 at 3599.330 kb on - strand, within PS417_16475 at 3599.358 kb on - strand at 3599.504 kb on + strand at 3599.546 kb on + strand, within PS417_16480 at 3599.669 kb on + strand, within PS417_16480 at 3599.703 kb on - strand, within PS417_16480 at 3599.703 kb on - strand, within PS417_16480 at 3599.928 kb on + strand, within PS417_16480 at 3599.928 kb on + strand, within PS417_16480 at 3599.929 kb on - strand, within PS417_16480 at 3599.952 kb on - strand, within PS417_16480 at 3599.952 kb on - strand, within PS417_16480 at 3600.224 kb on + strand, within PS417_16480 at 3600.225 kb on - strand, within PS417_16480 at 3600.225 kb on - strand, within PS417_16480 at 3600.317 kb on + strand, within PS417_16480 at 3600.318 kb on - strand, within PS417_16480 at 3600.318 kb on - strand, within PS417_16480 at 3600.318 kb on - strand, within PS417_16480 at 3600.623 kb on + strand at 3600.624 kb on - strand at 3600.708 kb on + strand at 3601.573 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 3,599,151 - PS417_16475 0.40 -0.6 3,599,218 - PS417_16475 0.58 +0.8 3,599,218 - PS417_16475 0.58 -1.0 3,599,330 - PS417_16475 0.88 -1.2 3,599,358 - -0.6 3,599,504 + -0.5 3,599,546 + PS417_16480 0.13 -3.9 3,599,669 + PS417_16480 0.22 -1.5 3,599,703 - PS417_16480 0.25 +0.7 3,599,703 - PS417_16480 0.25 -0.5 3,599,928 + PS417_16480 0.42 -0.6 3,599,928 + PS417_16480 0.42 -2.1 3,599,929 - PS417_16480 0.42 +0.3 3,599,952 - PS417_16480 0.44 +0.4 3,599,952 - PS417_16480 0.44 +1.2 3,600,224 + PS417_16480 0.64 -2.4 3,600,225 - PS417_16480 0.64 -0.8 3,600,225 - PS417_16480 0.64 +0.0 3,600,317 + PS417_16480 0.71 -1.1 3,600,318 - PS417_16480 0.71 -0.1 3,600,318 - PS417_16480 0.71 -1.9 3,600,318 - PS417_16480 0.71 +0.1 3,600,623 + -1.6 3,600,624 - -0.6 3,600,708 + -1.9 3,601,573 - +0.4
Or see this region's nucleotide sequence