Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_16030 and PS417_16035 are separated by 406 nucleotides PS417_16035 and PS417_16045 are separated by 147 nucleotides
PS417_16030: PS417_16030 - sulfurtransferase, at 3,513,167 to 3,514,750
_16030
PS417_16035: PS417_16035 - ABC transporter substrate-binding protein, at 3,515,157 to 3,516,131
_16035
PS417_16045: PS417_16045 - acyl-CoA dehydrogenase, at 3,516,279 to 3,517,457
_16045
Position (kb)
3515
3516
3517 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3514.208 kb on + strand, within PS417_16030 at 3514.208 kb on + strand, within PS417_16030 at 3514.370 kb on + strand, within PS417_16030 at 3514.370 kb on + strand, within PS417_16030 at 3514.371 kb on - strand, within PS417_16030 at 3514.457 kb on + strand, within PS417_16030 at 3514.457 kb on + strand at 3514.457 kb on + strand, within PS417_16030 at 3514.458 kb on - strand, within PS417_16030 at 3514.458 kb on - strand, within PS417_16030 at 3514.843 kb on + strand at 3515.418 kb on + strand, within PS417_16035 at 3515.419 kb on - strand, within PS417_16035 at 3515.419 kb on - strand, within PS417_16035 at 3515.790 kb on + strand, within PS417_16035 at 3515.790 kb on + strand, within PS417_16035 at 3515.791 kb on - strand, within PS417_16035 at 3515.869 kb on - strand, within PS417_16035 at 3516.765 kb on + strand, within PS417_16045 at 3517.050 kb on + strand, within PS417_16045
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 3,514,208 + PS417_16030 0.66 -2.8 3,514,208 + PS417_16030 0.66 -2.7 3,514,370 + PS417_16030 0.76 -0.3 3,514,370 + PS417_16030 0.76 -0.2 3,514,371 - PS417_16030 0.76 -0.7 3,514,457 + PS417_16030 0.81 +0.2 3,514,457 + +2.6 3,514,457 + PS417_16030 0.81 -0.7 3,514,458 - PS417_16030 0.82 +0.0 3,514,458 - PS417_16030 0.82 -0.6 3,514,843 + +2.2 3,515,418 + PS417_16035 0.27 -1.4 3,515,419 - PS417_16035 0.27 -0.9 3,515,419 - PS417_16035 0.27 +0.1 3,515,790 + PS417_16035 0.65 -2.9 3,515,790 + PS417_16035 0.65 -2.5 3,515,791 - PS417_16035 0.65 -1.8 3,515,869 - PS417_16035 0.73 -0.6 3,516,765 + PS417_16045 0.41 -2.7 3,517,050 + PS417_16045 0.65 +0.7
Or see this region's nucleotide sequence