Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_20845 and PS417_20850 are separated by 157 nucleotides PS417_20850 and PS417_20855 are separated by 20 nucleotides PS417_20855 and PS417_20860 are separated by 453 nucleotides
PS417_20845: PS417_20845 - hypothetical protein, at 4,525,805 to 4,526,851
_20845
PS417_20850: PS417_20850 - hypothetical protein, at 4,527,009 to 4,528,970
_20850
PS417_20855: PS417_20855 - hypothetical protein, at 4,528,991 to 4,529,422
_20855
PS417_20860: PS417_20860 - DNA polymerase III subunit gamma/tau, at 4,529,876 to 4,531,039
_20860
Position (kb)
4527
4528
4529 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4526.188 kb on - strand, within PS417_20845 at 4526.214 kb on + strand, within PS417_20845 at 4526.214 kb on + strand, within PS417_20845 at 4526.214 kb on + strand, within PS417_20845 at 4526.215 kb on - strand, within PS417_20845 at 4526.215 kb on - strand, within PS417_20845 at 4526.230 kb on - strand, within PS417_20845 at 4526.230 kb on - strand, within PS417_20845 at 4526.230 kb on - strand, within PS417_20845 at 4526.475 kb on + strand, within PS417_20845 at 4526.608 kb on + strand, within PS417_20845 at 4526.643 kb on + strand at 4526.643 kb on + strand, within PS417_20845 at 4526.750 kb on + strand at 4526.750 kb on + strand at 4526.754 kb on + strand at 4526.822 kb on - strand at 4526.822 kb on - strand at 4526.822 kb on - strand at 4526.867 kb on + strand at 4526.867 kb on + strand at 4526.867 kb on + strand at 4526.868 kb on - strand at 4526.868 kb on - strand at 4526.868 kb on - strand at 4526.872 kb on - strand at 4526.943 kb on + strand at 4526.943 kb on + strand at 4526.944 kb on - strand at 4526.944 kb on - strand at 4526.944 kb on - strand at 4526.957 kb on + strand at 4526.957 kb on + strand at 4526.958 kb on - strand at 4526.958 kb on - strand at 4527.001 kb on + strand at 4527.006 kb on - strand at 4527.040 kb on + strand at 4527.074 kb on - strand at 4527.074 kb on - strand at 4527.083 kb on - strand at 4527.083 kb on - strand at 4527.115 kb on + strand at 4527.115 kb on + strand at 4527.115 kb on + strand at 4527.115 kb on + strand at 4527.115 kb on + strand at 4527.115 kb on + strand at 4527.115 kb on + strand at 4527.115 kb on + strand at 4527.116 kb on - strand at 4527.116 kb on - strand at 4527.344 kb on - strand, within PS417_20850 at 4527.392 kb on - strand, within PS417_20850 at 4527.392 kb on - strand, within PS417_20850 at 4527.392 kb on - strand, within PS417_20850 at 4527.427 kb on + strand, within PS417_20850 at 4527.428 kb on - strand, within PS417_20850 at 4527.730 kb on + strand, within PS417_20850 at 4527.730 kb on + strand, within PS417_20850 at 4527.731 kb on - strand, within PS417_20850 at 4527.991 kb on + strand, within PS417_20850 at 4527.991 kb on + strand, within PS417_20850 at 4527.991 kb on + strand, within PS417_20850 at 4527.992 kb on - strand, within PS417_20850 at 4527.992 kb on - strand, within PS417_20850 at 4528.105 kb on + strand, within PS417_20850 at 4528.105 kb on + strand, within PS417_20850 at 4528.105 kb on + strand, within PS417_20850 at 4528.106 kb on - strand, within PS417_20850 at 4528.106 kb on - strand, within PS417_20850 at 4528.106 kb on - strand, within PS417_20850 at 4528.106 kb on - strand, within PS417_20850 at 4528.173 kb on - strand, within PS417_20850 at 4528.173 kb on - strand, within PS417_20850 at 4528.249 kb on - strand, within PS417_20850 at 4528.571 kb on - strand, within PS417_20850 at 4528.571 kb on - strand, within PS417_20850 at 4528.603 kb on + strand, within PS417_20850 at 4528.655 kb on + strand, within PS417_20850 at 4528.656 kb on - strand, within PS417_20850 at 4528.952 kb on + strand at 4528.971 kb on - strand at 4529.047 kb on + strand, within PS417_20855 at 4529.048 kb on - strand, within PS417_20855 at 4529.711 kb on - strand at 4529.773 kb on + strand at 4529.774 kb on - strand at 4529.774 kb on - strand at 4529.784 kb on - strand at 4529.932 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 remove 4,526,188 - PS417_20845 0.37 -0.4 4,526,214 + PS417_20845 0.39 +1.4 4,526,214 + PS417_20845 0.39 +0.9 4,526,214 + PS417_20845 0.39 +1.2 4,526,215 - PS417_20845 0.39 -0.2 4,526,215 - PS417_20845 0.39 +0.1 4,526,230 - PS417_20845 0.41 +0.6 4,526,230 - PS417_20845 0.41 +0.2 4,526,230 - PS417_20845 0.41 +0.1 4,526,475 + PS417_20845 0.64 +0.3 4,526,608 + PS417_20845 0.77 +0.2 4,526,643 + -0.3 4,526,643 + PS417_20845 0.80 -0.5 4,526,750 + +0.5 4,526,750 + +0.1 4,526,754 + +1.0 4,526,822 - -1.2 4,526,822 - -0.1 4,526,822 - +0.0 4,526,867 + +0.0 4,526,867 + +0.6 4,526,867 + -0.6 4,526,868 - -0.1 4,526,868 - -0.2 4,526,868 - +0.1 4,526,872 - -0.2 4,526,943 + +2.3 4,526,943 + -0.4 4,526,944 - -0.7 4,526,944 - +0.0 4,526,944 - -0.7 4,526,957 + -0.2 4,526,957 + -0.1 4,526,958 - -0.5 4,526,958 - -0.3 4,527,001 + -0.0 4,527,006 - -0.0 4,527,040 + -0.4 4,527,074 - -1.3 4,527,074 - +0.2 4,527,083 - -0.7 4,527,083 - -0.4 4,527,115 + -0.3 4,527,115 + +0.1 4,527,115 + +2.8 4,527,115 + -2.3 4,527,115 + -0.1 4,527,115 + -0.2 4,527,115 + +1.3 4,527,115 + -0.8 4,527,116 - +0.6 4,527,116 - -2.1 4,527,344 - PS417_20850 0.17 +0.5 4,527,392 - PS417_20850 0.20 +0.4 4,527,392 - PS417_20850 0.20 +0.8 4,527,392 - PS417_20850 0.20 +2.6 4,527,427 + PS417_20850 0.21 -0.5 4,527,428 - PS417_20850 0.21 +0.1 4,527,730 + PS417_20850 0.37 +0.1 4,527,730 + PS417_20850 0.37 -0.8 4,527,731 - PS417_20850 0.37 +0.7 4,527,991 + PS417_20850 0.50 +0.7 4,527,991 + PS417_20850 0.50 -0.7 4,527,991 + PS417_20850 0.50 -1.3 4,527,992 - PS417_20850 0.50 +0.4 4,527,992 - PS417_20850 0.50 -1.0 4,528,105 + PS417_20850 0.56 -0.7 4,528,105 + PS417_20850 0.56 -0.0 4,528,105 + PS417_20850 0.56 -0.0 4,528,106 - PS417_20850 0.56 +1.2 4,528,106 - PS417_20850 0.56 -1.1 4,528,106 - PS417_20850 0.56 +0.8 4,528,106 - PS417_20850 0.56 -0.0 4,528,173 - PS417_20850 0.59 +0.0 4,528,173 - PS417_20850 0.59 -0.2 4,528,249 - PS417_20850 0.63 -0.3 4,528,571 - PS417_20850 0.80 +0.8 4,528,571 - PS417_20850 0.80 -0.8 4,528,603 + PS417_20850 0.81 -0.6 4,528,655 + PS417_20850 0.84 -0.3 4,528,656 - PS417_20850 0.84 +0.2 4,528,952 + -0.7 4,528,971 - +0.4 4,529,047 + PS417_20855 0.13 -1.6 4,529,048 - PS417_20855 0.13 -2.3 4,529,711 - -0.9 4,529,773 + +0.9 4,529,774 - -0.0 4,529,774 - -0.5 4,529,784 - -0.2 4,529,932 + -0.1
Or see this region's nucleotide sequence