Experiment: Growth at 30C; with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_4250 and PP_4251 are separated by 13 nucleotides PP_4251 and PP_4252 are separated by 5 nucleotides PP_4252 and PP_4253 overlap by 4 nucleotides PP_4253 and PP_4254 are separated by 179 nucleotides PP_4254 and PP_4255 are separated by 1 nucleotides
PP_4250: PP_4250 - cytochrome c oxidase subunit I, cbb3-type, at 4,835,994 to 4,837,418
_4250
PP_4251: PP_4251 - cytochrome c oxidase subunit, cbb3-type, at 4,837,432 to 4,838,040
_4251
PP_4252: PP_4252 - cytochrome c oxidase subunit, cbb3-type, at 4,838,046 to 4,838,240
_4252
PP_4253: PP_4253 - cytochrome c oxidase subunit, cbb3-type, at 4,838,237 to 4,839,178
_4253
PP_4254: PP_4254 - conserved protein of unknown function, at 4,839,358 to 4,839,633
_4254
PP_4255: PP_4255 - cytochrome c oxidase subunit I, cbb3-type, at 4,839,635 to 4,841,077
_4255
Position (kb) 4838
4839
4840 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 4837.254 kb on + strand, within PP_4250 at 4837.255 kb on - strand, within PP_4250 at 4837.484 kb on + strand at 4837.485 kb on - strand at 4837.485 kb on - strand at 4837.606 kb on + strand, within PP_4251 at 4837.607 kb on - strand, within PP_4251 at 4837.804 kb on + strand, within PP_4251 at 4837.804 kb on + strand, within PP_4251 at 4837.804 kb on + strand, within PP_4251 at 4837.805 kb on - strand, within PP_4251 at 4837.846 kb on + strand, within PP_4251 at 4837.927 kb on + strand, within PP_4251 at 4837.999 kb on + strand at 4838.000 kb on - strand at 4838.228 kb on + strand at 4838.254 kb on + strand at 4838.254 kb on + strand at 4838.255 kb on - strand at 4838.258 kb on + strand at 4838.258 kb on + strand at 4838.258 kb on + strand at 4838.258 kb on + strand at 4838.259 kb on - strand at 4838.259 kb on - strand at 4838.268 kb on + strand at 4838.268 kb on + strand at 4838.268 kb on + strand at 4838.376 kb on + strand, within PP_4253 at 4838.377 kb on - strand, within PP_4253 at 4838.384 kb on + strand, within PP_4253 at 4838.384 kb on + strand, within PP_4253 at 4838.451 kb on - strand at 4838.463 kb on - strand, within PP_4253 at 4839.010 kb on + strand, within PP_4253 at 4839.014 kb on + strand, within PP_4253 at 4839.125 kb on + strand at 4839.125 kb on + strand at 4839.125 kb on + strand at 4839.125 kb on + strand at 4839.125 kb on + strand at 4839.126 kb on - strand at 4839.126 kb on - strand at 4839.126 kb on - strand at 4839.126 kb on - strand at 4839.131 kb on + strand at 4839.131 kb on + strand at 4839.131 kb on + strand at 4839.131 kb on + strand at 4839.131 kb on + strand at 4839.131 kb on + strand at 4839.131 kb on + strand at 4839.132 kb on - strand at 4839.132 kb on - strand at 4839.132 kb on - strand at 4839.132 kb on - strand at 4839.132 kb on - strand at 4839.132 kb on - strand at 4839.134 kb on - strand at 4839.134 kb on - strand at 4839.134 kb on - strand at 4839.296 kb on + strand at 4839.342 kb on + strand at 4839.342 kb on + strand at 4839.342 kb on + strand at 4839.342 kb on + strand at 4839.342 kb on + strand at 4839.343 kb on - strand at 4839.343 kb on - strand at 4839.343 kb on - strand at 4839.343 kb on - strand at 4839.343 kb on - strand at 4839.545 kb on - strand, within PP_4254 at 4839.564 kb on - strand, within PP_4254 at 4839.662 kb on + strand at 4839.662 kb on + strand at 4839.663 kb on - strand at 4839.663 kb on - strand at 4839.664 kb on + strand at 4839.664 kb on + strand at 4839.664 kb on + strand at 4839.664 kb on + strand at 4839.665 kb on - strand at 4839.665 kb on - strand at 4839.668 kb on + strand at 4839.668 kb on + strand at 4839.668 kb on + strand at 4839.668 kb on + strand at 4839.668 kb on + strand at 4839.669 kb on - strand at 4839.669 kb on - strand at 4839.669 kb on - strand at 4839.669 kb on - strand at 4839.669 kb on - strand at 4839.669 kb on - strand at 4839.669 kb on - strand at 4839.670 kb on + strand at 4839.670 kb on + strand at 4839.670 kb on + strand at 4839.670 kb on + strand at 4839.670 kb on + strand at 4839.671 kb on - strand at 4839.671 kb on - strand at 4839.869 kb on + strand, within PP_4255 at 4839.869 kb on + strand, within PP_4255 at 4839.869 kb on + strand, within PP_4255 at 4839.870 kb on - strand, within PP_4255 at 4839.870 kb on - strand, within PP_4255 at 4839.870 kb on - strand, within PP_4255 at 4839.870 kb on - strand, within PP_4255 at 4839.872 kb on + strand, within PP_4255 at 4839.872 kb on + strand, within PP_4255 at 4839.872 kb on + strand, within PP_4255 at 4839.872 kb on + strand, within PP_4255 at 4839.872 kb on + strand, within PP_4255 at 4839.872 kb on + strand, within PP_4255 at 4839.872 kb on + strand, within PP_4255 at 4839.873 kb on - strand, within PP_4255 at 4839.873 kb on - strand, within PP_4255 at 4839.873 kb on - strand, within PP_4255 at 4839.873 kb on - strand, within PP_4255 at 4839.873 kb on - strand, within PP_4255 at 4839.986 kb on + strand, within PP_4255 at 4839.987 kb on - strand, within PP_4255 at 4840.005 kb on - strand, within PP_4255 at 4840.055 kb on - strand, within PP_4255 at 4840.058 kb on + strand, within PP_4255 at 4840.059 kb on - strand, within PP_4255 at 4840.081 kb on + strand, within PP_4255 at 4840.109 kb on + strand, within PP_4255 at 4840.109 kb on + strand, within PP_4255 at 4840.109 kb on + strand, within PP_4255 at 4840.109 kb on + strand, within PP_4255 at 4840.109 kb on + strand, within PP_4255 at 4840.109 kb on + strand, within PP_4255 at 4840.109 kb on + strand, within PP_4255 at 4840.109 kb on + strand, within PP_4255 at 4840.109 kb on + strand, within PP_4255 at 4840.110 kb on - strand, within PP_4255 at 4840.110 kb on - strand, within PP_4255 at 4840.110 kb on - strand, within PP_4255 at 4840.110 kb on - strand, within PP_4255 at 4840.110 kb on - strand, within PP_4255 at 4840.110 kb on - strand, within PP_4255 at 4840.110 kb on - strand, within PP_4255 at 4840.110 kb on - strand, within PP_4255 at 4840.127 kb on + strand, within PP_4255 at 4840.127 kb on + strand, within PP_4255
Per-strain Table
Position Strand Gene LocusTag Fraction Growth at 30C; with MOPS remove 4,837,254 + PP_4250 0.88 -0.2 4,837,255 - PP_4250 0.88 -2.2 4,837,484 + +1.4 4,837,485 - +1.5 4,837,485 - -2.6 4,837,606 + PP_4251 0.29 -2.8 4,837,607 - PP_4251 0.29 -0.5 4,837,804 + PP_4251 0.61 +0.8 4,837,804 + PP_4251 0.61 +2.5 4,837,804 + PP_4251 0.61 +1.1 4,837,805 - PP_4251 0.61 -1.9 4,837,846 + PP_4251 0.68 -1.4 4,837,927 + PP_4251 0.81 -3.1 4,837,999 + -1.7 4,838,000 - -0.1 4,838,228 + +0.6 4,838,254 + -3.1 4,838,254 + -2.4 4,838,255 - -2.0 4,838,258 + -3.1 4,838,258 + -2.8 4,838,258 + +1.8 4,838,258 + +0.9 4,838,259 - -0.1 4,838,259 - -1.7 4,838,268 + -3.0 4,838,268 + -0.1 4,838,268 + +1.3 4,838,376 + PP_4253 0.15 +0.7 4,838,377 - PP_4253 0.15 -2.9 4,838,384 + PP_4253 0.16 +2.6 4,838,384 + PP_4253 0.16 +2.1 4,838,451 - +3.4 4,838,463 - PP_4253 0.24 +2.5 4,839,010 + PP_4253 0.82 -2.3 4,839,014 + PP_4253 0.82 +1.0 4,839,125 + -2.4 4,839,125 + +0.1 4,839,125 + -0.0 4,839,125 + -0.7 4,839,125 + +1.1 4,839,126 - +0.5 4,839,126 - -1.9 4,839,126 - -2.4 4,839,126 - +2.6 4,839,131 + +0.8 4,839,131 + -0.2 4,839,131 + +1.3 4,839,131 + -2.1 4,839,131 + -2.0 4,839,131 + +2.8 4,839,131 + -0.5 4,839,132 - +0.4 4,839,132 - -1.7 4,839,132 - +2.0 4,839,132 - -0.7 4,839,132 - -0.2 4,839,132 - -1.5 4,839,134 - +1.4 4,839,134 - +0.6 4,839,134 - -0.6 4,839,296 + -1.9 4,839,342 + -0.1 4,839,342 + -3.4 4,839,342 + +0.3 4,839,342 + -3.5 4,839,342 + -3.4 4,839,343 - +1.0 4,839,343 - -0.5 4,839,343 - -3.2 4,839,343 - +0.7 4,839,343 - -2.7 4,839,545 - PP_4254 0.68 -4.2 4,839,564 - PP_4254 0.75 +0.5 4,839,662 + -0.8 4,839,662 + -3.7 4,839,663 - -0.9 4,839,663 - -3.4 4,839,664 + +0.7 4,839,664 + -0.6 4,839,664 + +0.4 4,839,664 + -3.5 4,839,665 - -1.2 4,839,665 - -1.8 4,839,668 + -2.3 4,839,668 + +0.8 4,839,668 + +0.5 4,839,668 + +0.6 4,839,668 + -2.7 4,839,669 - +0.3 4,839,669 - +1.3 4,839,669 - +1.2 4,839,669 - -1.2 4,839,669 - -2.7 4,839,669 - -1.0 4,839,669 - -3.2 4,839,670 + +0.0 4,839,670 + -0.3 4,839,670 + +1.8 4,839,670 + -3.2 4,839,670 + -1.8 4,839,671 - -2.0 4,839,671 - +1.2 4,839,869 + PP_4255 0.16 +0.1 4,839,869 + PP_4255 0.16 +0.3 4,839,869 + PP_4255 0.16 +0.0 4,839,870 - PP_4255 0.16 -3.9 4,839,870 - PP_4255 0.16 -2.8 4,839,870 - PP_4255 0.16 -2.7 4,839,870 - PP_4255 0.16 -3.5 4,839,872 + PP_4255 0.16 -3.8 4,839,872 + PP_4255 0.16 -3.1 4,839,872 + PP_4255 0.16 +2.5 4,839,872 + PP_4255 0.16 +0.5 4,839,872 + PP_4255 0.16 -0.6 4,839,872 + PP_4255 0.16 -2.1 4,839,872 + PP_4255 0.16 +0.5 4,839,873 - PP_4255 0.16 +2.1 4,839,873 - PP_4255 0.16 +0.4 4,839,873 - PP_4255 0.16 -0.2 4,839,873 - PP_4255 0.16 +0.1 4,839,873 - PP_4255 0.16 -3.3 4,839,986 + PP_4255 0.24 -1.6 4,839,987 - PP_4255 0.24 +2.2 4,840,005 - PP_4255 0.26 +1.6 4,840,055 - PP_4255 0.29 +1.6 4,840,058 + PP_4255 0.29 +0.9 4,840,059 - PP_4255 0.29 -1.0 4,840,081 + PP_4255 0.31 -0.0 4,840,109 + PP_4255 0.33 -0.1 4,840,109 + PP_4255 0.33 -2.1 4,840,109 + PP_4255 0.33 -3.2 4,840,109 + PP_4255 0.33 +1.0 4,840,109 + PP_4255 0.33 -2.3 4,840,109 + PP_4255 0.33 -2.3 4,840,109 + PP_4255 0.33 -2.3 4,840,109 + PP_4255 0.33 -0.0 4,840,109 + PP_4255 0.33 -3.6 4,840,110 - PP_4255 0.33 -0.9 4,840,110 - PP_4255 0.33 -0.2 4,840,110 - PP_4255 0.33 +1.2 4,840,110 - PP_4255 0.33 +0.6 4,840,110 - PP_4255 0.33 -0.8 4,840,110 - PP_4255 0.33 +0.0 4,840,110 - PP_4255 0.33 +1.7 4,840,110 - PP_4255 0.33 +1.0 4,840,127 + PP_4255 0.34 -2.1 4,840,127 + PP_4255 0.34 +1.3
Or see this region's nucleotide sequence