Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_13670 and PS417_13675 are separated by 70 nucleotides PS417_13675 and PS417_13680 are separated by 65 nucleotides
PS417_13670: PS417_13670 - protease, at 3,007,733 to 3,009,712
_13670
PS417_13675: PS417_13675 - endoribonuclease L-PSP, at 3,009,783 to 3,010,163
_13675
PS417_13680: PS417_13680 - 3-oxoacyl-ACP synthase, at 3,010,229 to 3,011,497
_13680
Position (kb)
3009
3010
3011 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3008.943 kb on + strand, within PS417_13670 at 3008.964 kb on + strand, within PS417_13670 at 3008.977 kb on + strand, within PS417_13670 at 3008.977 kb on + strand, within PS417_13670 at 3008.978 kb on - strand, within PS417_13670 at 3008.979 kb on + strand, within PS417_13670 at 3008.980 kb on - strand, within PS417_13670 at 3009.113 kb on - strand, within PS417_13670 at 3009.447 kb on + strand, within PS417_13670 at 3009.619 kb on - strand at 3009.754 kb on + strand at 3009.829 kb on - strand, within PS417_13675 at 3009.892 kb on + strand, within PS417_13675 at 3009.935 kb on - strand, within PS417_13675 at 3010.141 kb on + strand at 3010.142 kb on - strand at 3010.231 kb on - strand at 3010.334 kb on - strand at 3010.334 kb on - strand at 3010.572 kb on + strand, within PS417_13680 at 3010.914 kb on - strand, within PS417_13680 at 3010.914 kb on - strand, within PS417_13680 at 3011.022 kb on + strand, within PS417_13680 at 3011.022 kb on + strand, within PS417_13680 at 3011.023 kb on - strand, within PS417_13680 at 3011.023 kb on - strand, within PS417_13680
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 3,008,943 + PS417_13670 0.61 +1.0 3,008,964 + PS417_13670 0.62 +0.2 3,008,977 + PS417_13670 0.63 -3.4 3,008,977 + PS417_13670 0.63 -2.7 3,008,978 - PS417_13670 0.63 -1.5 3,008,979 + PS417_13670 0.63 -1.3 3,008,980 - PS417_13670 0.63 +0.7 3,009,113 - PS417_13670 0.70 +0.8 3,009,447 + PS417_13670 0.87 +0.2 3,009,619 - +1.4 3,009,754 + -0.6 3,009,829 - PS417_13675 0.12 +1.3 3,009,892 + PS417_13675 0.29 +0.3 3,009,935 - PS417_13675 0.40 +0.4 3,010,141 + -0.4 3,010,142 - -1.9 3,010,231 - -1.5 3,010,334 - -0.4 3,010,334 - +2.4 3,010,572 + PS417_13680 0.27 -2.7 3,010,914 - PS417_13680 0.54 -1.4 3,010,914 - PS417_13680 0.54 +0.4 3,011,022 + PS417_13680 0.62 +2.2 3,011,022 + PS417_13680 0.62 +0.0 3,011,023 - PS417_13680 0.63 -0.4 3,011,023 - PS417_13680 0.63 -1.4
Or see this region's nucleotide sequence