Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_08465 and PS417_08470 are separated by 5 nucleotides PS417_08470 and PS417_08475 are separated by 132 nucleotides PS417_08475 and PS417_08480 are separated by 49 nucleotides PS417_08480 and PS417_08485 are separated by 64 nucleotides
PS417_08465: PS417_08465 - elongation factor GreAB, at 1,852,345 to 1,852,827
_08465
PS417_08470: PS417_08470 - hypothetical protein, at 1,852,833 to 1,853,201
_08470
PS417_08475: PS417_08475 - hypothetical protein, at 1,853,334 to 1,854,467
_08475
PS417_08480: PS417_08480 - elongation factor P, at 1,854,517 to 1,855,089
_08480
PS417_08485: PS417_08485 - alpha/beta hydrolase, at 1,855,154 to 1,856,170
_08485
Position (kb) 1853
1854
1855 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1852.339 kb on + strand at 1852.351 kb on - strand at 1852.360 kb on - strand at 1852.365 kb on + strand at 1852.366 kb on - strand at 1852.592 kb on + strand, within PS417_08465 at 1852.593 kb on - strand, within PS417_08465 at 1852.593 kb on - strand, within PS417_08465 at 1852.701 kb on - strand, within PS417_08465 at 1852.701 kb on - strand, within PS417_08465 at 1852.701 kb on - strand, within PS417_08465 at 1852.821 kb on + strand at 1852.822 kb on - strand at 1852.822 kb on - strand at 1852.929 kb on - strand, within PS417_08470 at 1852.993 kb on + strand, within PS417_08470 at 1853.095 kb on + strand, within PS417_08470 at 1853.096 kb on - strand, within PS417_08470 at 1853.296 kb on + strand at 1853.296 kb on + strand at 1854.450 kb on + strand at 1855.149 kb on - strand at 1855.263 kb on + strand, within PS417_08485 at 1855.264 kb on - strand, within PS417_08485 at 1855.268 kb on + strand, within PS417_08485 at 1855.311 kb on + strand, within PS417_08485 at 1855.312 kb on - strand, within PS417_08485 at 1855.446 kb on + strand, within PS417_08485 at 1855.447 kb on - strand, within PS417_08485 at 1855.447 kb on - strand, within PS417_08485 at 1855.447 kb on - strand, within PS417_08485 at 1855.447 kb on - strand, within PS417_08485 at 1855.447 kb on - strand, within PS417_08485
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 1,852,339 + -1.9 1,852,351 - -1.5 1,852,360 - -2.4 1,852,365 + +0.6 1,852,366 - +0.4 1,852,592 + PS417_08465 0.51 -0.9 1,852,593 - PS417_08465 0.51 -1.5 1,852,593 - PS417_08465 0.51 -0.4 1,852,701 - PS417_08465 0.74 +1.0 1,852,701 - PS417_08465 0.74 +0.6 1,852,701 - PS417_08465 0.74 -1.7 1,852,821 + -0.4 1,852,822 - -1.9 1,852,822 - -0.1 1,852,929 - PS417_08470 0.26 +1.4 1,852,993 + PS417_08470 0.43 +0.5 1,853,095 + PS417_08470 0.71 +0.1 1,853,096 - PS417_08470 0.71 -0.2 1,853,296 + +1.3 1,853,296 + +0.4 1,854,450 + -0.9 1,855,149 - +0.1 1,855,263 + PS417_08485 0.11 -0.2 1,855,264 - PS417_08485 0.11 -0.2 1,855,268 + PS417_08485 0.11 -0.4 1,855,311 + PS417_08485 0.15 +0.6 1,855,312 - PS417_08485 0.16 -2.9 1,855,446 + PS417_08485 0.29 +0.3 1,855,447 - PS417_08485 0.29 +0.4 1,855,447 - PS417_08485 0.29 +0.2 1,855,447 - PS417_08485 0.29 -1.2 1,855,447 - PS417_08485 0.29 -0.1 1,855,447 - PS417_08485 0.29 -0.3
Or see this region's nucleotide sequence