Experiment: Growth at 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_3671 and PP_3672 are separated by 14 nucleotides
PP_3671: PP_3671 - Oxidoreductase, aldo/keto reductase family, at 4,172,367 to 4,173,191
_3671
PP_3672: PP_3672 - conserved protein of unknown function, at 4,173,206 to 4,173,778
_3672
Position (kb) 4173
4174 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4172.209 kb on - strand at 4172.227 kb on + strand at 4172.227 kb on + strand at 4172.227 kb on + strand at 4172.228 kb on - strand at 4172.228 kb on - strand at 4172.312 kb on + strand at 4172.353 kb on + strand at 4172.353 kb on + strand at 4172.354 kb on - strand at 4172.610 kb on - strand, within PP_3671 at 4172.731 kb on + strand, within PP_3671 at 4172.791 kb on + strand, within PP_3671 at 4172.847 kb on + strand, within PP_3671 at 4172.848 kb on - strand, within PP_3671 at 4172.848 kb on - strand, within PP_3671 at 4172.848 kb on - strand, within PP_3671 at 4172.916 kb on + strand, within PP_3671 at 4172.916 kb on + strand, within PP_3671 at 4172.917 kb on - strand, within PP_3671 at 4173.264 kb on + strand, within PP_3672 at 4173.264 kb on + strand, within PP_3672 at 4173.489 kb on + strand, within PP_3672 at 4173.653 kb on - strand, within PP_3672 at 4173.653 kb on - strand, within PP_3672 at 4173.826 kb on - strand at 4173.828 kb on + strand at 4173.842 kb on - strand at 4173.849 kb on - strand at 4173.850 kb on + strand at 4173.851 kb on - strand at 4173.897 kb on + strand at 4173.897 kb on + strand at 4173.898 kb on - strand at 4173.904 kb on - strand at 4173.904 kb on - strand at 4173.910 kb on - strand at 4173.923 kb on + strand at 4173.923 kb on + strand at 4173.923 kb on + strand at 4173.954 kb on + strand at 4173.955 kb on - strand at 4173.955 kb on - strand at 4174.014 kb on + strand at 4174.028 kb on + strand at 4174.036 kb on + strand at 4174.036 kb on + strand at 4174.036 kb on + strand at 4174.036 kb on + strand at 4174.036 kb on + strand at 4174.036 kb on + strand at 4174.036 kb on + strand at 4174.036 kb on + strand at 4174.037 kb on - strand at 4174.037 kb on - strand at 4174.068 kb on + strand at 4174.068 kb on + strand at 4174.068 kb on + strand at 4174.069 kb on - strand at 4174.069 kb on - strand at 4174.179 kb on + strand at 4174.179 kb on + strand at 4174.180 kb on - strand at 4174.287 kb on + strand at 4174.288 kb on - strand at 4174.288 kb on - strand at 4174.355 kb on - strand at 4174.359 kb on - strand at 4174.359 kb on - strand at 4174.600 kb on + strand at 4174.601 kb on - strand at 4174.601 kb on - strand at 4174.601 kb on - strand at 4174.602 kb on + strand at 4174.602 kb on + strand at 4174.603 kb on - strand at 4174.686 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Growth at 30C remove 4,172,209 - +0.1 4,172,227 + +0.1 4,172,227 + +0.2 4,172,227 + -0.1 4,172,228 - +0.9 4,172,228 - -0.6 4,172,312 + -0.3 4,172,353 + +0.4 4,172,353 + -1.1 4,172,354 - +1.0 4,172,610 - PP_3671 0.29 +0.8 4,172,731 + PP_3671 0.44 +0.1 4,172,791 + PP_3671 0.51 +0.7 4,172,847 + PP_3671 0.58 -0.7 4,172,848 - PP_3671 0.58 +0.2 4,172,848 - PP_3671 0.58 +0.2 4,172,848 - PP_3671 0.58 -0.4 4,172,916 + PP_3671 0.67 +0.8 4,172,916 + PP_3671 0.67 -1.0 4,172,917 - PP_3671 0.67 -0.7 4,173,264 + PP_3672 0.10 +0.8 4,173,264 + PP_3672 0.10 -0.0 4,173,489 + PP_3672 0.49 +1.3 4,173,653 - PP_3672 0.78 +0.0 4,173,653 - PP_3672 0.78 +0.4 4,173,826 - +0.4 4,173,828 + +0.8 4,173,842 - -1.8 4,173,849 - +0.1 4,173,850 + +1.1 4,173,851 - -0.1 4,173,897 + +0.5 4,173,897 + +1.9 4,173,898 - -0.1 4,173,904 - -0.1 4,173,904 - +0.3 4,173,910 - +0.3 4,173,923 + +0.3 4,173,923 + +0.4 4,173,923 + +1.1 4,173,954 + -0.5 4,173,955 - -1.3 4,173,955 - +0.7 4,174,014 + -1.2 4,174,028 + +0.4 4,174,036 + +1.0 4,174,036 + +0.0 4,174,036 + +0.5 4,174,036 + -0.9 4,174,036 + +0.7 4,174,036 + -1.1 4,174,036 + -0.0 4,174,036 + -1.0 4,174,037 - -0.2 4,174,037 - +1.0 4,174,068 + +0.8 4,174,068 + +0.2 4,174,068 + -0.1 4,174,069 - +0.8 4,174,069 - -0.2 4,174,179 + -0.5 4,174,179 + +0.6 4,174,180 - -0.4 4,174,287 + +1.7 4,174,288 - +0.7 4,174,288 - -0.0 4,174,355 - +0.4 4,174,359 - +0.9 4,174,359 - +1.2 4,174,600 + +1.3 4,174,601 - -1.3 4,174,601 - +2.3 4,174,601 - +0.5 4,174,602 + +0.1 4,174,602 + +0.9 4,174,603 - +0.0 4,174,686 + -1.7
Or see this region's nucleotide sequence