Strain Fitness in Escherichia coli BW25113 around b1765
Experiment: 3-methyl-3-butenol (commercial) 0.5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 3-methyl-3-butenol (commercial) 0.5 vol% |
---|---|---|---|---|---|
remove | |||||
1,845,230 | - | selD | b1764 | 0.23 | -0.6 |
1,845,242 | - | selD | b1764 | 0.24 | -0.0 |
1,845,254 | - | selD | b1764 | 0.25 | +0.7 |
1,845,300 | - | selD | b1764 | 0.30 | -0.2 |
1,845,827 | - | selD | b1764 | 0.80 | -0.1 |
1,845,827 | - | selD | b1764 | 0.80 | +1.9 |
1,845,858 | - | selD | b1764 | 0.83 | +0.2 |
1,845,881 | - | selD | b1764 | 0.85 | +0.8 |
1,845,883 | - | selD | b1764 | 0.86 | +0.4 |
1,846,260 | + | ydjA | b1765 | 0.20 | +0.8 |
1,846,671 | - | -1.9 | |||
1,846,671 | - | -0.4 | |||
1,846,826 | - | +0.1 | |||
1,846,828 | + | +1.5 | |||
1,846,843 | - | +0.1 | |||
1,846,849 | - | +2.2 | |||
1,846,849 | - | +1.5 | |||
1,846,860 | + | -1.0 | |||
1,846,860 | + | +0.2 | |||
1,846,910 | - | -0.2 | |||
1,847,043 | - | -0.5 | |||
1,847,186 | - | sppA | b1766 | 0.18 | +0.5 |
1,847,251 | + | sppA | b1766 | 0.21 | -0.1 |
1,847,251 | + | sppA | b1766 | 0.21 | +0.2 |
1,847,481 | + | sppA | b1766 | 0.33 | +0.1 |
1,847,481 | + | -0.1 | |||
1,847,547 | - | sppA | b1766 | 0.37 | -0.0 |
1,847,614 | - | sppA | b1766 | 0.41 | +0.1 |
1,847,630 | - | sppA | b1766 | 0.41 | +0.4 |
1,847,630 | - | sppA | b1766 | 0.41 | +0.5 |
Or see this region's nucleotide sequence