Strain Fitness in Escherichia coli BW25113 around b1698
Experiment: 3-methyl-3-butenol (commercial) 0.5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 3-methyl-3-butenol (commercial) 0.5 vol% |
---|---|---|---|---|---|
remove | |||||
1,777,449 | + | +0.9 | |||
1,777,456 | + | +0.9 | |||
1,777,548 | - | +0.2 | |||
1,777,564 | + | +1.9 | |||
1,777,618 | + | +0.3 | |||
1,777,685 | - | +0.4 | |||
1,777,690 | - | -0.1 | |||
1,777,700 | + | -0.1 | |||
1,777,704 | - | -0.9 | |||
1,777,776 | - | ydiQ | b1697 | 0.18 | +0.7 |
1,777,865 | - | ydiQ | b1697 | 0.29 | -0.2 |
1,777,917 | - | ydiQ | b1697 | 0.36 | -0.3 |
1,778,003 | + | ydiQ | b1697 | 0.47 | -0.2 |
1,778,059 | + | ydiQ | b1697 | 0.55 | -0.1 |
1,778,071 | + | ydiQ | b1697 | 0.56 | +0.2 |
1,778,071 | + | ydiQ | b1697 | 0.56 | +0.3 |
1,778,071 | + | ydiQ | b1697 | 0.56 | +0.6 |
1,778,294 | + | ydiQ | b1697 | 0.85 | -0.3 |
1,778,469 | + | +0.2 | |||
1,778,740 | + | ydiR | b1698 | 0.34 | +0.5 |
1,778,933 | - | ydiR | b1698 | 0.54 | +1.3 |
1,779,145 | + | ydiR | b1698 | 0.77 | -0.3 |
1,779,222 | - | ydiR | b1698 | 0.85 | +0.4 |
1,779,423 | - | -0.1 | |||
1,779,424 | - | +0.9 | |||
1,779,424 | - | +0.6 | |||
1,779,484 | + | -0.2 | |||
1,779,721 | + | ydiS | b1699 | 0.23 | +0.3 |
1,779,847 | + | ydiS | b1699 | 0.33 | +0.5 |
1,780,127 | - | ydiS | b1699 | 0.55 | +1.1 |
Or see this region's nucleotide sequence