Strain Fitness in Escherichia coli BW25113 around b1233

Experiment: 3-methyl-3-butenol (commercial) 0.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-3-butenol (commercial) 0.5 vol%
1,286,916	+				+0.5
1,287,056	+				-0.2
1,287,064	+				-0.8
1,287,233	+	purU	b1232	0.27	+0.0
1,287,255	-	purU	b1232	0.30	-0.1
1,287,255	-	purU	b1232	0.30	-0.3
1,287,342	+	purU	b1232	0.40	+0.7
1,287,375	+	purU	b1232	0.44	+0.5
1,287,423	-	purU	b1232	0.50	-0.2
1,287,425	+	purU	b1232	0.50	+0.2
1,287,439	+	purU	b1232	0.51	-0.1
1,287,448	+	purU	b1232	0.53	+0.3
1,287,473	-	purU	b1232	0.56	-0.2
1,287,491	+	purU	b1232	0.58	+0.4
1,287,647	-	purU	b1232	0.76	-1.0
1,287,691	-	purU	b1232	0.81	+0.4
1,287,714	+	purU	b1232	0.84	+0.2
1,287,801	-				-1.0
1,287,801	-				-0.1
1,287,837	+				+1.2
1,287,886	+				+0.4
1,287,886	+				+0.1
1,287,948	-	ychJ	b1233	0.11	+1.1
1,287,948	-	ychJ	b1233	0.11	+0.5
1,288,051	+	ychJ	b1233	0.34	+0.5
1,288,133	-	ychJ	b1233	0.51	+0.8
1,288,262	+	ychJ	b1233	0.80	+0.5
1,288,263	+	ychJ	b1233	0.80	+1.0
1,288,263	+	ychJ	b1233	0.80	+0.2
1,288,299	+				-0.1
1,288,321	-				+0.3
1,288,405	-				-0.9
1,288,405	-				-0.4
1,288,405	-				+0.4
1,288,407	+				+1.1
1,288,410	-				-0.5
1,288,410	-				+0.3
1,288,439	-				-0.9
1,288,509	+				+1.5
1,288,510	+				-0.3
1,288,510	+				+1.4
1,288,514	+				+0.8
1,288,599	+	rssA	b1234	0.14	-0.1
1,288,690	+	rssA	b1234	0.25	+0.5
1,288,690	+	rssA	b1234	0.25	-0.3
1,288,713	+	rssA	b1234	0.27	+0.3
1,288,858	-	rssA	b1234	0.43	+0.7
1,288,883	-	rssA	b1234	0.46	+0.7
1,288,891	-	rssA	b1234	0.47	-0.5
1,288,924	-	rssA	b1234	0.50	-0.8
1,288,928	-	rssA	b1234	0.51	-0.5
1,288,928	-	rssA	b1234	0.51	-0.9
1,288,949	-	rssA	b1234	0.53	+0.7
1,288,949	-	rssA	b1234	0.53	-1.1
1,288,967	+	rssA	b1234	0.55	+1.1
1,289,015	+	rssA	b1234	0.60	+0.4
1,289,147	-	rssA	b1234	0.75	-0.1
1,289,214	-	rssA	b1234	0.82	-1.1