Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03280 and PS417_03285 overlap by 4 nucleotides PS417_03285 and PS417_03290 overlap by 11 nucleotides
PS417_03280: PS417_03280 - chromosome partitioning protein ParA, at 751,383 to 754,223
_03280
PS417_03285: PS417_03285 - chromosome partitioning protein, at 754,220 to 754,927
_03285
PS417_03290: PS417_03290 - hypothetical protein, at 754,917 to 756,194
_03290
Position (kb) 754
755 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 753.514 kb on + strand, within PS417_03280 at 753.514 kb on + strand, within PS417_03280 at 753.514 kb on + strand, within PS417_03280 at 753.534 kb on + strand, within PS417_03280 at 753.535 kb on - strand, within PS417_03280 at 753.535 kb on - strand, within PS417_03280 at 753.746 kb on + strand, within PS417_03280 at 753.794 kb on - strand, within PS417_03280 at 753.988 kb on + strand at 753.988 kb on + strand at 753.988 kb on + strand at 753.989 kb on - strand at 754.036 kb on + strand at 754.036 kb on + strand at 754.106 kb on + strand at 754.126 kb on + strand at 754.126 kb on + strand at 754.127 kb on - strand at 754.378 kb on + strand, within PS417_03285 at 754.570 kb on - strand, within PS417_03285 at 754.743 kb on + strand, within PS417_03285 at 754.746 kb on + strand, within PS417_03285 at 754.747 kb on - strand, within PS417_03285 at 754.834 kb on - strand, within PS417_03285 at 754.934 kb on + strand at 755.273 kb on - strand, within PS417_03290 at 755.278 kb on + strand, within PS417_03290 at 755.278 kb on + strand, within PS417_03290 at 755.279 kb on - strand, within PS417_03290 at 755.279 kb on - strand, within PS417_03290 at 755.279 kb on - strand, within PS417_03290 at 755.279 kb on - strand, within PS417_03290 at 755.860 kb on + strand, within PS417_03290 at 755.861 kb on - strand, within PS417_03290
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 753,514 + PS417_03280 0.75 -0.7 753,514 + PS417_03280 0.75 -1.3 753,514 + PS417_03280 0.75 -0.2 753,534 + PS417_03280 0.76 +0.2 753,535 - PS417_03280 0.76 -2.8 753,535 - PS417_03280 0.76 +0.2 753,746 + PS417_03280 0.83 +0.0 753,794 - PS417_03280 0.85 -0.4 753,988 + -1.1 753,988 + +0.1 753,988 + -0.1 753,989 - -0.4 754,036 + -1.3 754,036 + +0.1 754,106 + -0.9 754,126 + +1.5 754,126 + -0.4 754,127 - -2.6 754,378 + PS417_03285 0.22 -0.1 754,570 - PS417_03285 0.49 +0.9 754,743 + PS417_03285 0.74 +0.1 754,746 + PS417_03285 0.74 -1.0 754,747 - PS417_03285 0.74 -1.2 754,834 - PS417_03285 0.87 -2.0 754,934 + -1.8 755,273 - PS417_03290 0.28 -0.1 755,278 + PS417_03290 0.28 -0.5 755,278 + PS417_03290 0.28 +0.3 755,279 - PS417_03290 0.28 +0.5 755,279 - PS417_03290 0.28 +0.3 755,279 - PS417_03290 0.28 +1.9 755,279 - PS417_03290 0.28 -1.2 755,860 + PS417_03290 0.74 -0.9 755,861 - PS417_03290 0.74 -1.5
Or see this region's nucleotide sequence