Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_12195 and PS417_12200 are separated by 1 nucleotides PS417_12200 and PS417_12205 are separated by 0 nucleotides
PS417_12195: PS417_12195 - ABC transporter permease, at 2,649,432 to 2,650,451
_12195
PS417_12200: PS417_12200 - microcin ABC transporter permease, at 2,650,453 to 2,651,529
_12200
PS417_12205: PS417_12205 - hypothetical protein, at 2,651,530 to 2,653,362
_12205
Position (kb)
2650
2651
2652 Strain fitness (log2 ratio)
-2
-1
0
1 at 2649.752 kb on - strand, within PS417_12195 at 2649.752 kb on - strand, within PS417_12195 at 2649.884 kb on - strand, within PS417_12195 at 2649.884 kb on - strand, within PS417_12195 at 2650.040 kb on - strand, within PS417_12195 at 2650.040 kb on - strand, within PS417_12195 at 2650.132 kb on + strand, within PS417_12195 at 2650.147 kb on + strand, within PS417_12195 at 2650.210 kb on + strand, within PS417_12195 at 2650.211 kb on - strand, within PS417_12195 at 2650.721 kb on - strand, within PS417_12200 at 2650.721 kb on - strand, within PS417_12200 at 2650.721 kb on - strand, within PS417_12200 at 2650.779 kb on - strand, within PS417_12200 at 2651.112 kb on - strand, within PS417_12200 at 2651.112 kb on - strand, within PS417_12200 at 2651.277 kb on - strand, within PS417_12200 at 2651.277 kb on - strand, within PS417_12200 at 2651.331 kb on - strand, within PS417_12200 at 2651.519 kb on + strand at 2651.531 kb on + strand at 2651.585 kb on - strand at 2651.685 kb on + strand at 2651.706 kb on - strand at 2651.825 kb on + strand, within PS417_12205 at 2651.825 kb on + strand, within PS417_12205 at 2651.825 kb on + strand, within PS417_12205 at 2652.509 kb on + strand, within PS417_12205
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 remove 2,649,752 - PS417_12195 0.31 -0.2 2,649,752 - PS417_12195 0.31 -0.0 2,649,884 - PS417_12195 0.44 +0.5 2,649,884 - PS417_12195 0.44 -1.0 2,650,040 - PS417_12195 0.60 +1.1 2,650,040 - PS417_12195 0.60 +0.0 2,650,132 + PS417_12195 0.69 -1.0 2,650,147 + PS417_12195 0.70 -1.0 2,650,210 + PS417_12195 0.76 -0.2 2,650,211 - PS417_12195 0.76 +0.8 2,650,721 - PS417_12200 0.25 -0.3 2,650,721 - PS417_12200 0.25 -1.1 2,650,721 - PS417_12200 0.25 -1.0 2,650,779 - PS417_12200 0.30 -2.0 2,651,112 - PS417_12200 0.61 -1.0 2,651,112 - PS417_12200 0.61 +0.3 2,651,277 - PS417_12200 0.77 +0.1 2,651,277 - PS417_12200 0.77 -1.7 2,651,331 - PS417_12200 0.82 -0.9 2,651,519 + -0.8 2,651,531 + -0.7 2,651,585 - -0.3 2,651,685 + +0.9 2,651,706 - -0.4 2,651,825 + PS417_12205 0.16 -0.1 2,651,825 + PS417_12205 0.16 +0.2 2,651,825 + PS417_12205 0.16 +0.1 2,652,509 + PS417_12205 0.53 -0.5
Or see this region's nucleotide sequence