Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_28350 and PS417_28355 are separated by 87 nucleotides PS417_28355 and PS417_28360 overlap by 10 nucleotides PS417_28360 and PS417_28365 are separated by 65 nucleotides
PS417_28350: PS417_28350 - fatty acid methyltransferase, at 6,119,426 to 6,120,610
_28350
PS417_28355: PS417_28355 - cardiolipin synthetase, at 6,120,698 to 6,121,486
_28355
PS417_28360: PS417_28360 - hypothetical protein, at 6,121,477 to 6,122,322
_28360
PS417_28365: PS417_28365 - membrane protein, at 6,122,388 to 6,122,642
_28365
Position (kb)
6120
6121
6122 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 6119.751 kb on + strand, within PS417_28350 at 6119.784 kb on - strand, within PS417_28350 at 6119.909 kb on - strand, within PS417_28350 at 6119.909 kb on - strand, within PS417_28350 at 6120.126 kb on + strand, within PS417_28350 at 6120.127 kb on - strand, within PS417_28350 at 6120.228 kb on + strand, within PS417_28350 at 6120.229 kb on - strand, within PS417_28350 at 6120.229 kb on - strand, within PS417_28350 at 6120.259 kb on - strand, within PS417_28350 at 6120.259 kb on - strand, within PS417_28350 at 6120.259 kb on - strand, within PS417_28350 at 6120.279 kb on + strand, within PS417_28350 at 6120.279 kb on + strand, within PS417_28350 at 6120.279 kb on + strand, within PS417_28350 at 6120.279 kb on + strand, within PS417_28350 at 6120.280 kb on - strand, within PS417_28350 at 6120.280 kb on - strand, within PS417_28350 at 6120.280 kb on - strand, within PS417_28350 at 6120.293 kb on - strand, within PS417_28350 at 6120.293 kb on - strand, within PS417_28350 at 6120.581 kb on - strand at 6120.584 kb on + strand at 6120.670 kb on - strand at 6120.696 kb on + strand at 6120.696 kb on + strand at 6120.697 kb on - strand at 6120.700 kb on - strand at 6120.871 kb on + strand, within PS417_28355 at 6120.877 kb on - strand, within PS417_28355 at 6121.117 kb on + strand, within PS417_28355 at 6121.251 kb on + strand, within PS417_28355 at 6121.344 kb on + strand, within PS417_28355 at 6121.625 kb on + strand, within PS417_28360 at 6121.676 kb on + strand, within PS417_28360 at 6121.677 kb on - strand, within PS417_28360 at 6121.784 kb on + strand, within PS417_28360 at 6121.883 kb on + strand, within PS417_28360 at 6121.883 kb on + strand, within PS417_28360 at 6121.883 kb on + strand, within PS417_28360 at 6121.884 kb on - strand, within PS417_28360 at 6121.884 kb on - strand, within PS417_28360 at 6121.884 kb on - strand, within PS417_28360 at 6122.180 kb on + strand, within PS417_28360 at 6122.181 kb on - strand, within PS417_28360 at 6122.207 kb on + strand, within PS417_28360 at 6122.267 kb on + strand at 6122.268 kb on - strand at 6122.268 kb on - strand at 6122.268 kb on - strand at 6122.281 kb on + strand at 6122.316 kb on + strand at 6122.316 kb on + strand at 6122.317 kb on - strand at 6122.322 kb on + strand at 6122.323 kb on - strand at 6122.323 kb on - strand at 6122.323 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 remove 6,119,751 + PS417_28350 0.27 -0.7 6,119,784 - PS417_28350 0.30 -0.7 6,119,909 - PS417_28350 0.41 +0.8 6,119,909 - PS417_28350 0.41 -2.2 6,120,126 + PS417_28350 0.59 +2.9 6,120,127 - PS417_28350 0.59 -2.6 6,120,228 + PS417_28350 0.68 -0.3 6,120,229 - PS417_28350 0.68 +1.3 6,120,229 - PS417_28350 0.68 -2.0 6,120,259 - PS417_28350 0.70 +0.9 6,120,259 - PS417_28350 0.70 +0.2 6,120,259 - PS417_28350 0.70 +0.2 6,120,279 + PS417_28350 0.72 -2.0 6,120,279 + PS417_28350 0.72 +0.1 6,120,279 + PS417_28350 0.72 -0.3 6,120,279 + PS417_28350 0.72 +2.0 6,120,280 - PS417_28350 0.72 -1.1 6,120,280 - PS417_28350 0.72 +0.2 6,120,280 - PS417_28350 0.72 -0.4 6,120,293 - PS417_28350 0.73 -2.2 6,120,293 - PS417_28350 0.73 +0.4 6,120,581 - +0.3 6,120,584 + -1.7 6,120,670 - +1.7 6,120,696 + -0.1 6,120,696 + +0.0 6,120,697 - +0.1 6,120,700 - -1.1 6,120,871 + PS417_28355 0.22 +0.2 6,120,877 - PS417_28355 0.23 +1.5 6,121,117 + PS417_28355 0.53 +0.0 6,121,251 + PS417_28355 0.70 -0.4 6,121,344 + PS417_28355 0.82 -1.1 6,121,625 + PS417_28360 0.17 +1.9 6,121,676 + PS417_28360 0.24 -0.5 6,121,677 - PS417_28360 0.24 -0.4 6,121,784 + PS417_28360 0.36 -0.1 6,121,883 + PS417_28360 0.48 +0.6 6,121,883 + PS417_28360 0.48 +0.4 6,121,883 + PS417_28360 0.48 -0.2 6,121,884 - PS417_28360 0.48 +0.6 6,121,884 - PS417_28360 0.48 +0.1 6,121,884 - PS417_28360 0.48 -0.4 6,122,180 + PS417_28360 0.83 -1.4 6,122,181 - PS417_28360 0.83 -0.6 6,122,207 + PS417_28360 0.86 +0.8 6,122,267 + -0.9 6,122,268 - -0.0 6,122,268 - +0.6 6,122,268 - -0.1 6,122,281 + -0.9 6,122,316 + +0.4 6,122,316 + +0.2 6,122,317 - +0.1 6,122,322 + +0.9 6,122,323 - -0.1 6,122,323 - -0.5 6,122,323 - -0.5
Or see this region's nucleotide sequence