Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_21880 and PS417_21885 are separated by 155 nucleotides PS417_21885 and PS417_21890 are separated by 389 nucleotides
PS417_21880: PS417_21880 - fatty acid hydroxylase, at 4,748,756 to 4,749,619
_21880
PS417_21885: PS417_21885 - peptidase M4, at 4,749,775 to 4,750,083
_21885
PS417_21890: PS417_21890 - magnesium transporter CorA, at 4,750,473 to 4,751,495
_21890
Position (kb)
4749
4750
4751 Strain fitness (log2 ratio)
-2
-1
0
1 at 4748.901 kb on + strand, within PS417_21880 at 4748.973 kb on + strand, within PS417_21880 at 4749.119 kb on + strand, within PS417_21880 at 4749.119 kb on + strand, within PS417_21880 at 4749.119 kb on + strand, within PS417_21880 at 4749.264 kb on + strand, within PS417_21880 at 4749.277 kb on + strand, within PS417_21880 at 4749.277 kb on + strand, within PS417_21880 at 4749.301 kb on + strand, within PS417_21880 at 4749.705 kb on + strand at 4749.706 kb on - strand at 4749.745 kb on + strand at 4749.745 kb on + strand at 4749.768 kb on - strand at 4749.980 kb on + strand, within PS417_21885 at 4750.202 kb on - strand at 4750.205 kb on + strand at 4750.206 kb on - strand at 4750.226 kb on + strand at 4750.280 kb on + strand at 4750.377 kb on + strand at 4750.814 kb on + strand, within PS417_21890 at 4750.948 kb on + strand, within PS417_21890 at 4751.032 kb on + strand, within PS417_21890
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 remove 4,748,901 + PS417_21880 0.17 -0.4 4,748,973 + PS417_21880 0.25 +0.5 4,749,119 + PS417_21880 0.42 -1.7 4,749,119 + PS417_21880 0.42 -1.7 4,749,119 + PS417_21880 0.42 -0.2 4,749,264 + PS417_21880 0.59 -0.4 4,749,277 + PS417_21880 0.60 -1.2 4,749,277 + PS417_21880 0.60 -0.9 4,749,301 + PS417_21880 0.63 -0.1 4,749,705 + +0.7 4,749,706 - +0.1 4,749,745 + +0.7 4,749,745 + -0.1 4,749,768 - -1.5 4,749,980 + PS417_21885 0.66 -2.5 4,750,202 - +0.1 4,750,205 + -0.8 4,750,206 - +0.5 4,750,226 + +0.3 4,750,280 + +0.4 4,750,377 + +0.1 4,750,814 + PS417_21890 0.33 +0.7 4,750,948 + PS417_21890 0.46 -0.1 4,751,032 + PS417_21890 0.55 +0.5
Or see this region's nucleotide sequence