Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_15745 and PS417_15750 overlap by 7 nucleotides PS417_15750 and PS417_15755 are separated by 10 nucleotides PS417_15755 and PS417_15760 are separated by 9 nucleotides
PS417_15745: PS417_15745 - lipid carrier protein, at 3,453,395 to 3,453,856
_15745
PS417_15750: PS417_15750 - protease, at 3,453,850 to 3,454,740
_15750
PS417_15755: PS417_15755 - protease, at 3,454,751 to 3,455,746
_15755
PS417_15760: PS417_15760 - molybdenum cofactor biosynthesis protein MoaA, at 3,455,756 to 3,456,982
_15760
Position (kb)
3454
3455
3456 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3453.752 kb on - strand at 3454.142 kb on + strand at 3454.382 kb on + strand, within PS417_15750 at 3454.543 kb on + strand, within PS417_15750 at 3454.644 kb on - strand, within PS417_15750 at 3454.680 kb on - strand at 3454.710 kb on - strand at 3454.909 kb on - strand, within PS417_15755 at 3455.206 kb on - strand, within PS417_15755 at 3455.206 kb on - strand, within PS417_15755 at 3455.443 kb on - strand, within PS417_15755 at 3455.563 kb on - strand, within PS417_15755 at 3455.563 kb on - strand, within PS417_15755 at 3455.563 kb on - strand, within PS417_15755 at 3455.563 kb on - strand, within PS417_15755 at 3455.563 kb on - strand, within PS417_15755 at 3455.669 kb on + strand at 3455.670 kb on - strand at 3455.673 kb on + strand at 3455.674 kb on - strand at 3455.674 kb on - strand at 3455.674 kb on - strand at 3455.805 kb on - strand at 3455.831 kb on + strand at 3456.045 kb on - strand, within PS417_15760 at 3456.372 kb on + strand, within PS417_15760 at 3456.373 kb on - strand, within PS417_15760 at 3456.373 kb on - strand, within PS417_15760 at 3456.570 kb on - strand, within PS417_15760
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 remove 3,453,752 - +1.0 3,454,142 + +1.1 3,454,382 + PS417_15750 0.60 +0.5 3,454,543 + PS417_15750 0.78 +0.2 3,454,644 - PS417_15750 0.89 +0.1 3,454,680 - -0.8 3,454,710 - +1.3 3,454,909 - PS417_15755 0.16 -1.9 3,455,206 - PS417_15755 0.46 +0.2 3,455,206 - PS417_15755 0.46 -1.7 3,455,443 - PS417_15755 0.69 +0.0 3,455,563 - PS417_15755 0.82 +0.0 3,455,563 - PS417_15755 0.82 -0.3 3,455,563 - PS417_15755 0.82 -1.3 3,455,563 - PS417_15755 0.82 -0.1 3,455,563 - PS417_15755 0.82 +0.3 3,455,669 + +0.7 3,455,670 - -0.2 3,455,673 + +1.9 3,455,674 - -1.5 3,455,674 - +0.4 3,455,674 - +0.3 3,455,805 - -0.4 3,455,831 + -0.4 3,456,045 - PS417_15760 0.24 -0.3 3,456,372 + PS417_15760 0.50 +1.2 3,456,373 - PS417_15760 0.50 -1.2 3,456,373 - PS417_15760 0.50 -0.7 3,456,570 - PS417_15760 0.66 +0.1
Or see this region's nucleotide sequence