Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03210 and PS417_03215 are separated by 0 nucleotides PS417_03215 and PS417_03220 are separated by 184 nucleotides PS417_03220 and PS417_03225 are separated by 35 nucleotides
PS417_03210: PS417_03210 - calcium:proton antiporter, at 733,815 to 734,906
_03210
PS417_03215: PS417_03215 - 8-oxoguanine deaminase, at 734,907 to 736,262
_03215
PS417_03220: PS417_03220 - short-chain dehydrogenase, at 736,447 to 737,133
_03220
PS417_03225: PS417_03225 - thymidylate synthase, at 737,169 to 737,750
_03225
Position (kb) 734
735
736
737 Strain fitness (log2 ratio) -1
0
1
2
3 at 734.124 kb on + strand, within PS417_03210 at 734.125 kb on - strand, within PS417_03210 at 734.230 kb on - strand, within PS417_03210 at 734.343 kb on + strand, within PS417_03210 at 734.343 kb on + strand, within PS417_03210 at 734.343 kb on + strand, within PS417_03210 at 734.343 kb on + strand at 734.343 kb on + strand, within PS417_03210 at 734.343 kb on + strand, within PS417_03210 at 734.344 kb on - strand, within PS417_03210 at 734.344 kb on - strand, within PS417_03210 at 734.344 kb on - strand, within PS417_03210 at 734.344 kb on - strand, within PS417_03210 at 734.344 kb on - strand, within PS417_03210 at 734.382 kb on + strand, within PS417_03210 at 734.382 kb on + strand, within PS417_03210 at 734.394 kb on + strand, within PS417_03210 at 734.667 kb on - strand, within PS417_03210 at 734.667 kb on - strand, within PS417_03210 at 734.667 kb on - strand, within PS417_03210 at 734.880 kb on - strand at 734.905 kb on - strand at 735.192 kb on + strand, within PS417_03215 at 735.241 kb on + strand, within PS417_03215 at 735.241 kb on + strand, within PS417_03215 at 735.242 kb on - strand, within PS417_03215 at 735.242 kb on - strand, within PS417_03215 at 735.496 kb on + strand, within PS417_03215 at 735.496 kb on + strand, within PS417_03215 at 735.497 kb on - strand, within PS417_03215 at 735.497 kb on - strand, within PS417_03215 at 735.691 kb on + strand, within PS417_03215 at 735.692 kb on - strand, within PS417_03215 at 735.837 kb on + strand, within PS417_03215 at 735.838 kb on - strand, within PS417_03215 at 735.843 kb on + strand, within PS417_03215 at 735.880 kb on + strand, within PS417_03215 at 735.880 kb on + strand, within PS417_03215 at 735.881 kb on - strand, within PS417_03215 at 736.055 kb on - strand, within PS417_03215 at 736.055 kb on - strand, within PS417_03215 at 736.055 kb on - strand, within PS417_03215 at 736.055 kb on - strand, within PS417_03215 at 736.358 kb on + strand at 736.358 kb on + strand at 736.358 kb on + strand at 736.358 kb on + strand at 736.364 kb on + strand at 736.364 kb on + strand at 736.364 kb on + strand at 736.381 kb on + strand at 736.381 kb on + strand at 736.382 kb on - strand at 736.388 kb on - strand at 736.432 kb on - strand at 736.448 kb on + strand at 736.505 kb on + strand at 736.506 kb on - strand at 736.685 kb on + strand, within PS417_03220 at 736.686 kb on - strand at 737.179 kb on - strand at 737.231 kb on + strand, within PS417_03225 at 737.231 kb on + strand, within PS417_03225 at 737.232 kb on - strand, within PS417_03225 at 737.232 kb on - strand, within PS417_03225 at 737.232 kb on - strand, within PS417_03225 at 737.232 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 remove 734,124 + PS417_03210 0.28 -0.1 734,125 - PS417_03210 0.28 -0.4 734,230 - PS417_03210 0.38 -0.9 734,343 + PS417_03210 0.48 -0.5 734,343 + PS417_03210 0.48 -0.8 734,343 + PS417_03210 0.48 -0.4 734,343 + -1.3 734,343 + PS417_03210 0.48 +0.2 734,343 + PS417_03210 0.48 -0.1 734,344 - PS417_03210 0.48 -0.0 734,344 - PS417_03210 0.48 +0.2 734,344 - PS417_03210 0.48 +0.1 734,344 - PS417_03210 0.48 -0.4 734,344 - PS417_03210 0.48 +0.9 734,382 + PS417_03210 0.52 -0.4 734,382 + PS417_03210 0.52 -0.4 734,394 + PS417_03210 0.53 -0.7 734,667 - PS417_03210 0.78 +1.8 734,667 - PS417_03210 0.78 +0.1 734,667 - PS417_03210 0.78 +2.2 734,880 - -0.1 734,905 - +0.1 735,192 + PS417_03215 0.21 +0.5 735,241 + PS417_03215 0.25 +0.0 735,241 + PS417_03215 0.25 +0.6 735,242 - PS417_03215 0.25 +0.9 735,242 - PS417_03215 0.25 +0.3 735,496 + PS417_03215 0.43 -1.0 735,496 + PS417_03215 0.43 +0.6 735,497 - PS417_03215 0.44 -0.6 735,497 - PS417_03215 0.44 +0.1 735,691 + PS417_03215 0.58 +0.2 735,692 - PS417_03215 0.58 +0.7 735,837 + PS417_03215 0.69 +0.2 735,838 - PS417_03215 0.69 +0.3 735,843 + PS417_03215 0.69 -0.7 735,880 + PS417_03215 0.72 +1.4 735,880 + PS417_03215 0.72 +3.1 735,881 - PS417_03215 0.72 +2.3 736,055 - PS417_03215 0.85 +0.5 736,055 - PS417_03215 0.85 +1.2 736,055 - PS417_03215 0.85 -0.7 736,055 - PS417_03215 0.85 +0.2 736,358 + -1.0 736,358 + +0.6 736,358 + +0.3 736,358 + +0.0 736,364 + +0.3 736,364 + -1.4 736,364 + +0.9 736,381 + +0.7 736,381 + -0.7 736,382 - -0.3 736,388 - +0.2 736,432 - -1.3 736,448 + +0.8 736,505 + +1.3 736,506 - -0.5 736,685 + PS417_03220 0.35 +0.6 736,686 - -0.9 737,179 - +0.4 737,231 + PS417_03225 0.11 -0.1 737,231 + PS417_03225 0.11 +1.3 737,232 - PS417_03225 0.11 -0.1 737,232 - PS417_03225 0.11 +1.2 737,232 - PS417_03225 0.11 -0.2 737,232 - -0.3
Or see this region's nucleotide sequence