Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_23435 and PS417_23440 are separated by 173 nucleotides PS417_23440 and PS417_23445 overlap by 1 nucleotides PS417_23445 and PS417_23450 are separated by 149 nucleotides
PS417_23435: PS417_23435 - serine/threonine protein kinase, at 5,076,669 to 5,077,580
_23435
PS417_23440: PS417_23440 - alpha/beta hydrolase, at 5,077,754 to 5,078,659
_23440
PS417_23445: PS417_23445 - aldolase, at 5,078,659 to 5,079,441
_23445
PS417_23450: PS417_23450 - membrane protein, at 5,079,591 to 5,080,277
_23450
Position (kb) 5077
5078
5079 Strain fitness (log2 ratio) -1
0
1
2 at 5076.910 kb on + strand, within PS417_23435 at 5076.910 kb on + strand, within PS417_23435 at 5076.910 kb on + strand, within PS417_23435 at 5076.910 kb on + strand, within PS417_23435 at 5077.114 kb on + strand, within PS417_23435 at 5077.115 kb on - strand, within PS417_23435 at 5077.115 kb on - strand, within PS417_23435 at 5077.115 kb on - strand, within PS417_23435 at 5077.115 kb on - strand, within PS417_23435 at 5077.115 kb on - strand, within PS417_23435 at 5077.115 kb on - strand, within PS417_23435 at 5077.154 kb on - strand, within PS417_23435 at 5077.199 kb on - strand, within PS417_23435 at 5077.812 kb on + strand at 5077.812 kb on + strand at 5077.813 kb on - strand at 5077.918 kb on + strand, within PS417_23440 at 5077.918 kb on + strand, within PS417_23440 at 5077.919 kb on - strand, within PS417_23440 at 5077.919 kb on - strand, within PS417_23440 at 5077.919 kb on - strand, within PS417_23440 at 5078.026 kb on + strand, within PS417_23440 at 5078.028 kb on + strand, within PS417_23440 at 5078.028 kb on + strand, within PS417_23440 at 5078.028 kb on + strand, within PS417_23440 at 5078.028 kb on + strand, within PS417_23440 at 5078.028 kb on + strand, within PS417_23440 at 5078.028 kb on + strand, within PS417_23440 at 5078.028 kb on + strand, within PS417_23440 at 5078.028 kb on + strand, within PS417_23440 at 5078.028 kb on + strand, within PS417_23440 at 5078.029 kb on - strand, within PS417_23440 at 5078.029 kb on - strand, within PS417_23440 at 5078.029 kb on - strand, within PS417_23440 at 5078.029 kb on - strand, within PS417_23440 at 5078.029 kb on - strand, within PS417_23440 at 5078.029 kb on - strand, within PS417_23440 at 5078.029 kb on - strand, within PS417_23440 at 5078.508 kb on + strand, within PS417_23440 at 5078.508 kb on + strand, within PS417_23440 at 5078.667 kb on + strand at 5078.670 kb on - strand at 5079.115 kb on + strand, within PS417_23445 at 5079.115 kb on + strand, within PS417_23445 at 5079.115 kb on + strand at 5079.153 kb on + strand at 5079.153 kb on + strand, within PS417_23445 at 5079.153 kb on + strand, within PS417_23445 at 5079.154 kb on - strand, within PS417_23445 at 5079.155 kb on + strand, within PS417_23445 at 5079.176 kb on + strand, within PS417_23445 at 5079.176 kb on + strand, within PS417_23445 at 5079.177 kb on - strand, within PS417_23445 at 5079.303 kb on + strand, within PS417_23445 at 5079.497 kb on - strand at 5079.497 kb on - strand at 5079.497 kb on - strand at 5079.567 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 remove 5,076,910 + PS417_23435 0.26 -0.7 5,076,910 + PS417_23435 0.26 +0.4 5,076,910 + PS417_23435 0.26 +1.4 5,076,910 + PS417_23435 0.26 -0.5 5,077,114 + PS417_23435 0.49 -0.9 5,077,115 - PS417_23435 0.49 +0.1 5,077,115 - PS417_23435 0.49 -0.6 5,077,115 - PS417_23435 0.49 -0.2 5,077,115 - PS417_23435 0.49 -0.7 5,077,115 - PS417_23435 0.49 +0.0 5,077,115 - PS417_23435 0.49 -1.3 5,077,154 - PS417_23435 0.53 +1.3 5,077,199 - PS417_23435 0.58 -1.7 5,077,812 + -1.7 5,077,812 + +0.8 5,077,813 - -1.4 5,077,918 + PS417_23440 0.18 +0.6 5,077,918 + PS417_23440 0.18 +0.4 5,077,919 - PS417_23440 0.18 +0.4 5,077,919 - PS417_23440 0.18 -0.5 5,077,919 - PS417_23440 0.18 +1.5 5,078,026 + PS417_23440 0.30 +0.7 5,078,028 + PS417_23440 0.30 +0.6 5,078,028 + PS417_23440 0.30 +0.3 5,078,028 + PS417_23440 0.30 +0.9 5,078,028 + PS417_23440 0.30 +1.6 5,078,028 + PS417_23440 0.30 +0.8 5,078,028 + PS417_23440 0.30 +0.6 5,078,028 + PS417_23440 0.30 +0.2 5,078,028 + PS417_23440 0.30 +0.1 5,078,028 + PS417_23440 0.30 -0.3 5,078,029 - PS417_23440 0.30 -0.7 5,078,029 - PS417_23440 0.30 -0.2 5,078,029 - PS417_23440 0.30 +0.3 5,078,029 - PS417_23440 0.30 -0.6 5,078,029 - PS417_23440 0.30 +0.8 5,078,029 - PS417_23440 0.30 +0.8 5,078,029 - PS417_23440 0.30 +0.2 5,078,508 + PS417_23440 0.83 +1.9 5,078,508 + PS417_23440 0.83 +1.0 5,078,667 + -0.7 5,078,670 - +0.1 5,079,115 + PS417_23445 0.58 +0.2 5,079,115 + PS417_23445 0.58 +0.3 5,079,115 + +0.3 5,079,153 + +0.3 5,079,153 + PS417_23445 0.63 -0.1 5,079,153 + PS417_23445 0.63 +0.1 5,079,154 - PS417_23445 0.63 +0.3 5,079,155 + PS417_23445 0.63 -1.1 5,079,176 + PS417_23445 0.66 +0.1 5,079,176 + PS417_23445 0.66 +0.4 5,079,177 - PS417_23445 0.66 -0.7 5,079,303 + PS417_23445 0.82 -0.2 5,079,497 - +0.0 5,079,497 - -0.1 5,079,497 - -0.1 5,079,567 + +0.3
Or see this region's nucleotide sequence