Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_07345 and PS417_07350 are separated by 30 nucleotides PS417_07350 and PS417_07355 are separated by 112 nucleotides PS417_07355 and PS417_07360 overlap by 26 nucleotides
PS417_07345: PS417_07345 - cyanate hydratase, at 1,619,323 to 1,619,793
_07345
PS417_07350: PS417_07350 - carbonic anhydrase, at 1,619,824 to 1,620,456
_07350
PS417_07355: PS417_07355 - transcriptional regulator, at 1,620,569 to 1,621,435
_07355
PS417_07360: PS417_07360 - ArtI protein, at 1,621,410 to 1,622,183
_07360
Position (kb)
1620
1621
1622 Strain fitness (log2 ratio)
-1
0
1
2 at 1619.913 kb on - strand, within PS417_07350 at 1619.913 kb on - strand, within PS417_07350 at 1620.510 kb on - strand at 1620.552 kb on + strand at 1620.553 kb on - strand at 1620.758 kb on + strand, within PS417_07355 at 1620.758 kb on + strand, within PS417_07355 at 1620.758 kb on + strand, within PS417_07355 at 1620.758 kb on + strand, within PS417_07355 at 1620.758 kb on + strand, within PS417_07355 at 1620.759 kb on - strand, within PS417_07355 at 1620.759 kb on - strand, within PS417_07355 at 1621.010 kb on - strand, within PS417_07355 at 1621.161 kb on - strand, within PS417_07355 at 1621.172 kb on + strand, within PS417_07355 at 1621.172 kb on + strand, within PS417_07355 at 1621.173 kb on - strand, within PS417_07355 at 1621.192 kb on - strand, within PS417_07355 at 1621.448 kb on - strand at 1621.540 kb on + strand, within PS417_07360 at 1621.540 kb on + strand, within PS417_07360 at 1622.020 kb on + strand, within PS417_07360 at 1622.021 kb on - strand, within PS417_07360 at 1622.021 kb on - strand, within PS417_07360 at 1622.048 kb on - strand, within PS417_07360 at 1622.048 kb on - strand, within PS417_07360 at 1622.221 kb on - strand at 1622.300 kb on - strand at 1622.339 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 remove 1,619,913 - PS417_07350 0.14 +0.4 1,619,913 - PS417_07350 0.14 -1.2 1,620,510 - -0.0 1,620,552 + +0.2 1,620,553 - -1.2 1,620,758 + PS417_07355 0.22 +1.1 1,620,758 + PS417_07355 0.22 +0.1 1,620,758 + PS417_07355 0.22 -0.4 1,620,758 + PS417_07355 0.22 +0.1 1,620,758 + PS417_07355 0.22 +0.3 1,620,759 - PS417_07355 0.22 +0.1 1,620,759 - PS417_07355 0.22 -0.2 1,621,010 - PS417_07355 0.51 +0.6 1,621,161 - PS417_07355 0.68 +2.2 1,621,172 + PS417_07355 0.70 -0.9 1,621,172 + PS417_07355 0.70 +1.4 1,621,173 - PS417_07355 0.70 +0.1 1,621,192 - PS417_07355 0.72 +0.7 1,621,448 - -0.2 1,621,540 + PS417_07360 0.17 -0.1 1,621,540 + PS417_07360 0.17 -0.2 1,622,020 + PS417_07360 0.79 +1.2 1,622,021 - PS417_07360 0.79 -0.6 1,622,021 - PS417_07360 0.79 +0.3 1,622,048 - PS417_07360 0.82 -0.0 1,622,048 - PS417_07360 0.82 -1.0 1,622,221 - -1.4 1,622,300 - +0.2 1,622,339 - -0.9
Or see this region's nucleotide sequence