Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03725 and PS417_03730 are separated by 0 nucleotides PS417_03730 and PS417_03735 are separated by 85 nucleotides PS417_03735 and PS417_03740 are separated by 91 nucleotides
PS417_03725: PS417_03725 - acyltransferase, at 843,873 to 844,772
_03725
PS417_03730: PS417_03730 - phosphate acetyltransferase, at 844,773 to 846,872
_03730
PS417_03735: PS417_03735 - hypothetical protein, at 846,958 to 847,149
_03735
PS417_03740: PS417_03740 - peptidylprolyl isomerase, at 847,241 to 847,726
_03740
Position (kb) 844
845
846
847 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 843.818 kb on + strand at 843.818 kb on + strand at 843.818 kb on + strand at 843.819 kb on - strand at 843.985 kb on + strand, within PS417_03725 at 844.062 kb on + strand, within PS417_03725 at 844.252 kb on - strand, within PS417_03725 at 844.465 kb on + strand, within PS417_03725 at 844.517 kb on - strand, within PS417_03725 at 844.517 kb on - strand, within PS417_03725 at 844.529 kb on - strand, within PS417_03725 at 844.758 kb on + strand at 844.774 kb on + strand at 844.774 kb on + strand at 844.778 kb on + strand at 844.778 kb on + strand at 844.779 kb on - strand at 844.784 kb on + strand at 844.785 kb on - strand at 844.785 kb on - strand at 844.825 kb on + strand at 844.975 kb on - strand at 845.047 kb on + strand, within PS417_03730 at 845.156 kb on - strand, within PS417_03730 at 845.388 kb on - strand, within PS417_03730 at 845.892 kb on - strand, within PS417_03730 at 845.914 kb on + strand, within PS417_03730 at 846.910 kb on + strand at 846.910 kb on + strand at 846.910 kb on + strand at 846.910 kb on + strand at 846.910 kb on + strand at 846.911 kb on - strand at 847.277 kb on + strand at 847.278 kb on - strand at 847.280 kb on - strand at 847.280 kb on - strand at 847.340 kb on + strand, within PS417_03740 at 847.357 kb on + strand, within PS417_03740 at 847.358 kb on - strand, within PS417_03740 at 847.358 kb on - strand, within PS417_03740 at 847.425 kb on + strand, within PS417_03740 at 847.452 kb on - strand, within PS417_03740 at 847.742 kb on + strand at 847.742 kb on + strand at 847.746 kb on + strand at 847.746 kb on + strand at 847.851 kb on + strand at 847.852 kb on - strand at 847.852 kb on - strand at 847.852 kb on - strand at 847.852 kb on - strand at 847.852 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 remove 843,818 + -0.6 843,818 + +0.3 843,818 + +0.3 843,819 - +0.8 843,985 + PS417_03725 0.12 -0.6 844,062 + PS417_03725 0.21 -0.6 844,252 - PS417_03725 0.42 -2.9 844,465 + PS417_03725 0.66 -0.9 844,517 - PS417_03725 0.72 +0.2 844,517 - PS417_03725 0.72 -1.2 844,529 - PS417_03725 0.73 +0.9 844,758 + +0.1 844,774 + -0.2 844,774 + +0.1 844,778 + -0.6 844,778 + +1.3 844,779 - +1.1 844,784 + -1.0 844,785 - -0.7 844,785 - +0.1 844,825 + -0.3 844,975 - -1.2 845,047 + PS417_03730 0.13 -0.5 845,156 - PS417_03730 0.18 -0.8 845,388 - PS417_03730 0.29 -2.3 845,892 - PS417_03730 0.53 -0.8 845,914 + PS417_03730 0.54 -2.0 846,910 + -1.0 846,910 + +1.0 846,910 + -0.4 846,910 + -0.9 846,910 + -0.1 846,911 - -0.5 847,277 + -1.0 847,278 - +0.8 847,280 - +0.2 847,280 - +0.4 847,340 + PS417_03740 0.20 -1.0 847,357 + PS417_03740 0.24 -1.1 847,358 - PS417_03740 0.24 +1.9 847,358 - PS417_03740 0.24 +0.4 847,425 + PS417_03740 0.38 +0.5 847,452 - PS417_03740 0.43 -1.0 847,742 + +0.3 847,742 + +0.2 847,746 + -1.6 847,746 + +0.7 847,851 + -0.8 847,852 - -0.8 847,852 - +0.2 847,852 - -0.4 847,852 - +0.0 847,852 - -0.1
Or see this region's nucleotide sequence