Strain Fitness in Escherichia coli BW25113 around b1560

Experiment: Butyrolactam 3 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Butyrolactam 3 vol%
1,640,350	+				+0.1
1,640,365	-				+0.7
1,640,603	-	b1559	b1559	0.12	-0.6
1,640,620	-	b1559	b1559	0.14	-0.1
1,640,620	-	b1559	b1559	0.14	-0.5
1,640,635	-	b1559	b1559	0.16	+0.2
1,640,635	-	b1559	b1559	0.16	+0.5
1,640,771	-	b1559	b1559	0.34	+0.2
1,640,876	-	b1559	b1559	0.48	+0.5
1,640,876	-	b1559	b1559	0.48	-0.1
1,640,884	+	b1559	b1559	0.49	+0.4
1,640,884	+	b1559	b1559	0.49	-1.0
1,640,967	-	b1559	b1559	0.60	-0.1
1,641,185	-	b1559	b1559	0.89	+0.1
1,641,196	+				-1.9
1,641,253	+				+0.3
1,641,585	+	ydfU	b1560	0.29	+0.3
1,641,585	+	ydfU	b1560	0.29	-1.1
1,641,779	+	ydfU	b1560	0.48	-1.2
1,641,831	-	ydfU	b1560	0.53	-1.0
1,641,934	-	ydfU	b1560	0.62	-0.6
1,642,013	-	ydfU	b1560	0.70	-1.1
1,642,253	-				+0.5
1,642,270	+				-0.2
1,642,284	-				-1.1
1,642,299	+				+0.1
1,642,307	-				-1.0
1,642,382	+				-0.5
1,642,401	+				-0.1
1,642,406	+				-0.6
1,642,488	+				-0.1
1,642,531	-				-1.2
1,642,629	+				+2.4
1,642,629	+				-0.1
1,642,629	+				+1.9
1,642,645	+				+0.9
1,642,663	-				-0.8
1,642,769	-	rem	b1561	0.37	+0.1
1,643,141	+				+0.0
1,643,261	-	hokD	b1562	0.76	-0.0