Strain Fitness in Escherichia coli BW25113 around b2264

Experiment: pinene 0.3125 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pinene 0.3125 vol%
2,374,673	-	menB	b2262	0.80	-1.4
2,374,831	+				-1.3
2,374,831	+				-1.1
2,374,885	+				-0.2
2,374,893	-				-0.7
2,375,223	-	yfbB	b2263	0.48	-0.3
2,375,307	-	yfbB	b2263	0.59	-1.4
2,375,363	-	yfbB	b2263	0.67	-0.8
2,375,570	+				-0.4
2,375,570	+				-0.0
2,375,616	-				+1.1
2,375,616	-				+0.1
2,375,795	-	menD	b2264	0.11	-0.9
2,376,112	-	menD	b2264	0.30	-0.8
2,376,143	-	menD	b2264	0.32	-1.7
2,376,143	-	menD	b2264	0.32	-1.1
2,376,359	+	menD	b2264	0.45	-1.4
2,376,359	+	menD	b2264	0.45	-1.0
2,376,515	+	menD	b2264	0.54	-1.2
2,376,554	-	menD	b2264	0.56	-0.6
2,376,585	+	menD	b2264	0.58	-0.7
2,376,585	+	menD	b2264	0.58	-0.0
2,376,605	+	menD	b2264	0.59	-1.5
2,376,790	+	menD	b2264	0.71	-1.0
2,376,798	-	menD	b2264	0.71	-0.9
2,376,798	-	menD	b2264	0.71	-0.6
2,377,105	+	menD	b2264	0.89	-0.8
2,377,105	+	menD	b2264	0.89	-1.2
2,377,151	-				-1.0
2,377,217	-				-0.7
2,377,217	-				-0.3
2,377,232	-				-1.4
2,377,294	+				+0.2
2,377,312	+				+0.2
2,377,320	-				+0.6
2,377,320	-				+0.2
2,377,320	-				+0.4
2,377,398	+				+0.2
2,377,451	+				-0.2
2,377,531	+	menF	b2265	0.12	+0.2
2,377,590	-	menF	b2265	0.17	+0.5
2,377,590	-	menF	b2265	0.17	+1.1
2,377,662	-	menF	b2265	0.23	+1.3
2,377,692	+	menF	b2265	0.25	-0.7
2,377,692	+	menF	b2265	0.25	-0.8
2,377,692	+	menF	b2265	0.25	+0.2
2,377,814	-	menF	b2265	0.34	+1.2
2,377,851	+	menF	b2265	0.37	-0.2
2,377,901	-	menF	b2265	0.41	+1.1
2,378,222	+	menF	b2265	0.66	+0.0
2,378,224	+	menF	b2265	0.66	+0.3
2,378,261	+	menF	b2265	0.69	-0.2
2,378,269	-	menF	b2265	0.69	-2.3
2,378,269	-	menF	b2265	0.69	+0.6
2,378,269	-	menF	b2265	0.69	+0.3
2,378,269	-	menF	b2265	0.69	+0.9
2,378,269	-	menF	b2265	0.69	+0.4