Strain Fitness in Escherichia coli BW25113 around b0008

Experiment: pinene 0.3125 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pinene 0.3125 vol%
7,264	-	yaaJ	b0007	0.51	+0.1
7,264	-	yaaJ	b0007	0.51	+1.5
7,319	-	yaaJ	b0007	0.55	+0.5
7,342	+	yaaJ	b0007	0.57	-0.5
7,356	+	yaaJ	b0007	0.58	+0.6
7,356	+	yaaJ	b0007	0.58	-0.5
7,371	-	yaaJ	b0007	0.59	+0.2
7,560	+	yaaJ	b0007	0.72	+0.8
7,560	+	yaaJ	b0007	0.72	+1.0
7,560	+	yaaJ	b0007	0.72	+1.0
7,560	+	yaaJ	b0007	0.72	+0.4
7,560	+	yaaJ	b0007	0.72	-0.3
7,644	+	yaaJ	b0007	0.78	+0.1
7,686	-	yaaJ	b0007	0.81	+0.1
7,750	-	yaaJ	b0007	0.85	+0.2
7,771	-	yaaJ	b0007	0.87	+0.1
7,800	+	yaaJ	b0007	0.89	+0.3
7,889	+				-0.2
7,889	+				-0.4
7,897	-				+0.7
7,941	-				-2.3
7,968	+				-0.1
7,997	+				-0.6
8,015	+				+0.3
8,015	+				-0.0
8,051	+				-0.3
8,051	-				-0.2
8,059	-				+0.4
8,059	-				-0.7
8,096	+				+0.8
8,096	+				-0.4
8,125	+				-0.6
8,195	-				-0.1
8,197	+				-0.5
8,197	+				-1.1
8,205	-				-0.6
8,270	-				+0.4
8,270	-				-1.0
8,312	+				-0.4
8,400	+	talB	b0008	0.17	-1.1
8,400	+	talB	b0008	0.17	-0.3
8,607	-	talB	b0008	0.39	-0.6
8,623	-	talB	b0008	0.40	-1.5
8,625	-	talB	b0008	0.41	-0.8
8,625	-	talB	b0008	0.41	-1.0
8,625	-	talB	b0008	0.41	-1.1
8,630	-	talB	b0008	0.41	-0.7
8,670	-	talB	b0008	0.45	-0.3
8,670	-	talB	b0008	0.45	+0.3
8,711	+	talB	b0008	0.50	-0.8
8,721	+	talB	b0008	0.51	+0.6
8,721	+	talB	b0008	0.51	-0.9
8,721	+	talB	b0008	0.51	-0.7
8,729	-	talB	b0008	0.51	-0.4
8,729	-	talB	b0008	0.51	-0.0
8,813	+	talB	b0008	0.60	-0.6
8,830	+	talB	b0008	0.62	+0.1
8,870	+	talB	b0008	0.66	-0.5
8,872	+	talB	b0008	0.66	-0.4
8,934	+	talB	b0008	0.73	+1.7
8,979	-	talB	b0008	0.78	-0.7
8,988	-	talB	b0008	0.79	-0.5
9,016	+	talB	b0008	0.82	-1.7
9,034	-	talB	b0008	0.83	-1.4
9,079	-	talB	b0008	0.88	-0.3
9,094	+	talB	b0008	0.90	-0.3
9,185	+				+0.4
9,206	+				+0.3
9,206	+				-0.5
9,224	-				-0.8
9,228	-				-0.3
9,229	-				+0.5
9,261	+				-0.1
9,261	+				+0.0
9,376	-	mog	b0009	0.12	+0.6
9,376	-	mog	b0009	0.12	+0.0
9,376	-	mog	b0009	0.12	-0.6
9,403	+	mog	b0009	0.16	+1.0
9,406	-	mog	b0009	0.17	+0.1
9,451	-	mog	b0009	0.25	+0.5
9,477	-	mog	b0009	0.29	-0.5
9,477	-	mog	b0009	0.29	+0.8
9,483	-	mog	b0009	0.30	-0.5
9,485	+	mog	b0009	0.30	-0.3
9,485	+	mog	b0009	0.30	-0.3
9,508	-	mog	b0009	0.34	+0.3
9,553	-	mog	b0009	0.42	-1.0
9,553	-	mog	b0009	0.42	+0.3
9,601	+	mog	b0009	0.50	+0.2
9,763	-	mog	b0009	0.78	-1.0
9,763	-	mog	b0009	0.78	+1.7
9,765	-	mog	b0009	0.78	-0.6
9,799	+	mog	b0009	0.84	+0.1
9,816	+	mog	b0009	0.87	-1.1
9,826	-	mog	b0009	0.88	+0.3
9,826	-	mog	b0009	0.88	-1.7
9,862	-				+1.2
9,941	+				-0.6
10,021	-	yaaH	b0010	0.16	+0.7
10,021	-	yaaH	b0010	0.16	+0.2
10,184	+	yaaH	b0010	0.45	-0.3