Strain Fitness in Escherichia coli BW25113 around b1828

Experiment: Cholinium hydrogen phosphate 10 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholinium hydrogen phosphate 10 vol%
1,907,333	-				+0.5
1,907,333	-				+0.6
1,907,352	-				+0.7
1,907,389	-				+0.7
1,907,462	-				+0.6
1,907,560	+	kdgR	b1827	0.29	+2.6
1,907,609	-	kdgR	b1827	0.35	-0.0
1,907,609	-	kdgR	b1827	0.35	+0.4
1,907,698	-	kdgR	b1827	0.46	+0.0
1,908,131	-				+0.1
1,908,133	-				+0.5
1,908,151	-				+0.7
1,908,195	-				-0.4
1,908,258	-				-1.4
1,908,326	+				-0.0
1,908,404	-				-0.1
1,908,705	-	b1828	b1828	0.29	+0.1
1,908,713	+	b1828	b1828	0.30	+0.6
1,908,762	-	b1828	b1828	0.34	+0.4
1,908,789	-	b1828	b1828	0.36	-0.4
1,908,902	-	b1828	b1828	0.44	+0.3
1,908,922	-	b1828	b1828	0.45	+0.7
1,908,968	-	b1828	b1828	0.49	+1.3
1,909,023	-	b1828	b1828	0.53	-0.1
1,909,405	+	b1828	b1828	0.80	+0.7
1,909,411	+	b1828	b1828	0.81	+0.4
1,909,437	+	b1828	b1828	0.83	+0.6
1,909,623	-				+0.6
1,909,623	-				+1.9
1,909,831	-	htpX	b1829	0.13	-0.2
1,909,831	-	htpX	b1829	0.13	-0.1
1,910,032	+	htpX	b1829	0.35	-0.6
1,910,119	+	htpX	b1829	0.45	-0.6
1,910,119	+	htpX	b1829	0.45	-0.0
1,910,121	+	htpX	b1829	0.46	+0.2
1,910,143	-	htpX	b1829	0.48	+0.9
1,910,228	-	htpX	b1829	0.58	-0.1
1,910,486	-	htpX	b1829	0.87	-0.9
1,910,486	-	htpX	b1829	0.87	+0.7
1,910,624	+				+0.2
1,910,643	+				+0.6