Strain Fitness in Escherichia coli BW25113 around b1742
Experiment: Cholinium hydrogen phosphate 10 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cholinium hydrogen phosphate 10 vol% |
---|---|---|---|---|---|
remove | |||||
1,821,454 | + | -0.0 | |||
1,821,462 | - | -0.4 | |||
1,821,680 | - | ydjQ | b1741 | 0.16 | -0.3 |
1,821,871 | - | ydjQ | b1741 | 0.37 | +0.1 |
1,821,878 | + | ydjQ | b1741 | 0.38 | -1.9 |
1,821,927 | + | ydjQ | b1741 | 0.44 | -0.0 |
1,821,927 | + | ydjQ | b1741 | 0.44 | -0.5 |
1,822,080 | + | ydjQ | b1741 | 0.61 | -0.3 |
1,822,080 | + | ydjQ | b1741 | 0.61 | +0.6 |
1,822,304 | + | ydjQ | b1741 | 0.86 | +0.3 |
1,822,740 | - | b1742 | b1742 | 0.61 | +0.6 |
1,822,740 | - | b1742 | b1742 | 0.61 | +0.4 |
1,822,963 | - | +0.1 | |||
1,823,108 | + | +0.8 | |||
1,823,191 | - | +0.7 | |||
1,823,293 | - | spy | b1743 | 0.27 | -0.2 |
1,823,519 | + | spy | b1743 | 0.73 | +0.2 |
1,823,549 | + | spy | b1743 | 0.79 | -0.2 |
1,823,549 | + | spy | b1743 | 0.79 | +0.1 |
1,823,559 | + | spy | b1743 | 0.81 | +1.6 |
1,823,587 | + | spy | b1743 | 0.87 | +0.5 |
1,823,595 | - | spy | b1743 | 0.89 | +0.7 |
1,823,595 | - | spy | b1743 | 0.89 | -1.2 |
1,823,613 | + | -2.2 | |||
1,823,621 | - | +1.0 | |||
1,823,629 | - | +1.0 | |||
1,823,629 | - | +1.0 | |||
1,823,683 | + | +1.1 | |||
1,823,686 | + | -1.3 | |||
1,823,703 | + | +0.1 | |||
1,823,711 | - | +1.7 | |||
1,823,729 | - | +1.0 |
Or see this region's nucleotide sequence