Strain Fitness in Escherichia coli BW25113 around b1400

Experiment: Cholinium hydrogen phosphate 10 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholinium hydrogen phosphate 10 vol%
1,461,562	+				-0.3
1,461,562	+				-0.2
1,461,638	+				-0.1
1,461,687	+	paaX	b1399	0.13	-0.5
1,461,873	+	paaX	b1399	0.33	-0.9
1,461,873	+	paaX	b1399	0.33	-1.1
1,461,938	+	paaX	b1399	0.39	-1.1
1,461,978	+	paaX	b1399	0.44	+0.0
1,462,399	-	paaX	b1399	0.88	+0.3
1,462,521	+				-0.4
1,462,521	+				-1.0
1,462,975	+	paaY	b1400	0.81	+1.1
1,462,975	+	paaY	b1400	0.81	-0.2
1,462,988	+	paaY	b1400	0.83	+1.3
1,463,000	+	paaY	b1400	0.85	-0.4
1,463,053	+				+0.0
1,463,053	+				+0.3
1,463,080	+				-0.4
1,463,082	+				+0.8
1,463,499	-				-0.0
1,463,499	-				+1.0
1,463,754	-	ydbA	b4492	0.13	+2.5
1,463,761	-	ydbA	b4492	0.14	+2.2
1,463,762	-	ydbA	b4492	0.14	-1.0
1,463,764	-	ydbA	b4492	0.14	+1.0
1,463,764	-	ydbA	b4492	0.14	+1.0
1,463,791	+	ydbA	b4492	0.15	+1.0
1,463,801	+	ydbA	b4492	0.15	-0.3
1,463,809	-	ydbA	b4492	0.16	+2.4
1,463,813	+	ydbA	b4492	0.16	+1.0
1,463,813	+	ydbA	b4492	0.16	-0.6
1,463,813	+	ydbA	b4492	0.16	+0.3
1,463,813	+	ydbA	b4492	0.16	+0.4
1,463,821	-	ydbA	b4492	0.16	+1.0
1,463,822	-	ydbA	b4492	0.16	+1.0
1,463,874	+	ydbA	b4492	0.18	+0.1
1,463,874	+	ydbA	b4492	0.18	-0.4
1,463,924	-	ydbA	b4492	0.20	+0.6
1,463,928	-	ydbA	b4492	0.20	+1.2
1,463,932	-	ydbA	b4492	0.21	+0.4
1,463,933	-	ydbA	b4492	0.21	-1.4
1,463,971	-	ydbA	b4492	0.22	+0.1
1,463,971	-	ydbA	b4492	0.22	-0.5
1,463,989	-	ydbA	b4492	0.23	+3.3
1,464,012	-	ydbA	b4492	0.24	+0.6
1,464,023	-	ydbA	b4492	0.24	-0.3
1,464,023	-	ydbA	b4492	0.24	-1.0
1,464,026	-	ydbA	b4492	0.24	-2.6
1,464,026	-	ydbA	b4492	0.24	+0.4