Strain Fitness in Escherichia coli BW25113 around b1139

Experiment: Cholinium hydrogen phosphate 10 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholinium hydrogen phosphate 10 vol%
1,197,326	-	ymfE	b1138	0.81	+0.3
1,197,530	-				+1.0
1,197,781	+				+1.0
1,198,462	+	lit	b1139	0.61	+1.0
1,198,531	+	lit	b1139	0.69	+1.0
1,198,539	-	lit	b1139	0.69	+1.0
1,198,539	-	lit	b1139	0.69	+0.4
1,198,560	-	lit	b1139	0.72	-0.6
1,198,564	+	lit	b1139	0.72	+1.0
1,198,564	+	lit	b1139	0.72	+1.0
1,198,572	-	lit	b1139	0.73	+1.8
1,198,618	+	lit	b1139	0.78	+1.0
1,198,620	-	lit	b1139	0.79	+1.8
1,198,625	-	lit	b1139	0.79	+1.0
1,198,626	-	lit	b1139	0.79	-1.3
1,198,626	-	lit	b1139	0.79	+1.6
1,198,657	-	lit	b1139	0.83	+0.9
1,198,657	-	lit	b1139	0.83	+1.0
1,198,677	+	lit	b1139	0.85	+1.0
1,198,681	-	lit	b1139	0.85	+2.7
1,198,684	-	lit	b1139	0.86	+2.0
1,198,684	-	lit	b1139	0.86	+2.0
1,198,688	+	lit	b1139	0.86	+1.0
1,198,693	-	lit	b1139	0.87	+0.3
1,198,695	-	lit	b1139	0.87	+0.2
1,198,696	-	lit	b1139	0.87	+1.0
1,198,816	-				+0.5
1,198,884	-				+0.7
1,198,915	-				-0.1
1,198,915	-				+0.3
1,198,915	-				+0.0
1,198,932	-				-1.6
1,198,988	-				-0.3
1,199,013	-				+0.3
1,199,056	-	intE	b1140	0.14	+0.4
1,199,056	-	intE	b1140	0.14	-0.8
1,199,086	-	intE	b1140	0.16	+0.5
1,199,086	-	intE	b1140	0.16	+0.1
1,199,130	-	intE	b1140	0.20	-1.4
1,199,130	-	intE	b1140	0.20	+0.1
1,199,145	-	intE	b1140	0.22	+0.4
1,199,147	+	intE	b1140	0.22	-1.3
1,199,155	-	intE	b1140	0.22	+0.5
1,199,177	+	intE	b1140	0.24	-0.2
1,199,177	+	intE	b1140	0.24	+0.7
1,199,177	+	intE	b1140	0.24	-1.2
1,199,185	-	intE	b1140	0.25	+0.2
1,199,185	-	intE	b1140	0.25	+0.1
1,199,185	-	intE	b1140	0.25	-0.4
1,199,187	+	intE	b1140	0.25	+0.0
1,199,187	+	intE	b1140	0.25	+1.2
1,199,188	+	intE	b1140	0.25	+0.2
1,199,189	+	intE	b1140	0.25	-2.1
1,199,195	-	intE	b1140	0.26	-0.8
1,199,197	+	intE	b1140	0.26	+1.0
1,199,199	-	intE	b1140	0.26	+0.4
1,199,207	+	intE	b1140	0.27	+1.6
1,199,207	+	intE	b1140	0.27	+0.4
1,199,208	-	intE	b1140	0.27	-0.8
1,199,216	-	intE	b1140	0.28	+1.1
1,199,295	+	intE	b1140	0.35	+0.1
1,199,369	+	intE	b1140	0.41	-0.3
1,199,369	+	intE	b1140	0.41	+0.5
1,199,378	+	intE	b1140	0.42	-0.1
1,199,378	-	intE	b1140	0.42	+2.3
1,199,379	-	intE	b1140	0.42	+0.3
1,199,446	-	intE	b1140	0.48	+0.3
1,199,492	+	intE	b1140	0.52	-0.0
1,199,505	+	intE	b1140	0.53	-0.9
1,199,534	-	intE	b1140	0.56	+0.5
1,199,550	+	intE	b1140	0.57	+0.4
1,199,600	+	intE	b1140	0.62	+0.2
1,199,631	-	intE	b1140	0.65	+0.7
1,199,631	-	intE	b1140	0.65	+1.2
1,199,681	-	intE	b1140	0.69	+0.7
1,199,692	+	intE	b1140	0.70	+0.4
1,199,692	+	intE	b1140	0.70	+1.5
1,199,736	-	intE	b1140	0.74	-0.6
1,199,742	+	intE	b1140	0.74	+1.6
1,199,742	+	intE	b1140	0.74	+0.3