Strain Fitness in Escherichia coli BW25113 around b4620

Experiment: Cholinium glutamate 10 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholinium glutamate 10 vol%
4,236,906	-	yjbH	b4029	0.60	+0.7
4,236,944	+	yjbH	b4029	0.61	-0.0
4,236,944	+	yjbH	b4029	0.61	-0.7
4,236,992	-	yjbH	b4029	0.64	+0.3
4,236,992	-	yjbH	b4029	0.64	-0.3
4,237,034	+	yjbH	b4029	0.66	-0.2
4,237,113	+	yjbH	b4029	0.69	-0.7
4,237,200	-	yjbH	b4029	0.74	-0.3
4,237,233	-	yjbH	b4029	0.75	-0.5
4,237,282	-	yjbH	b4029	0.77	+0.1
4,237,326	+	yjbH	b4029	0.80	+0.1
4,237,326	+	yjbH	b4029	0.80	+0.1
4,237,406	+	yjbH	b4029	0.83	+0.3
4,237,440	-	yjbH	b4029	0.85	+1.3
4,237,472	-	yjbH	b4029	0.87	+0.5
4,237,488	+	yjbH	b4029	0.87	-1.5
4,237,526	-	yjbH	b4029	0.89	+0.9
4,237,533	+	yjbH	b4029	0.89	-0.6
4,237,578	-				-0.3
4,237,578	-				+0.3
4,237,580	-				+0.1
4,237,667	+				-0.3
4,237,667	+				-0.4
4,237,781	+				-0.1
4,237,907	-	yjbT	b4620	0.38	+0.2
4,237,911	+	yjbT	b4620	0.40	+0.1
4,237,911	+	yjbT	b4620	0.40	+0.6
4,237,931	+	yjbT	b4620	0.47	+0.8
4,237,931	+	yjbT	b4620	0.47	+1.3
4,237,950	+	yjbT	b4620	0.54	+0.3
4,237,963	-	yjbT	b4620	0.58	-0.5
4,238,017	+	yjbT	b4620	0.78	+0.4
4,238,017	+	yjbT	b4620	0.78	+0.7
4,238,320	-				+1.1
4,238,331	+				-0.9
4,238,331	+				-0.6
4,238,335	+				-0.6
4,238,360	+				-0.6
4,238,419	+	yjbA	b4030	0.17	+0.9
4,238,419	+	yjbA	b4030	0.17	+0.7
4,238,526	-	yjbA	b4030	0.43	-0.4
4,238,600	+	yjbA	b4030	0.61	+0.1
4,238,631	+	yjbA	b4030	0.69	+0.2
4,238,631	+	yjbA	b4030	0.69	-0.7
4,238,686	+	yjbA	b4030	0.82	-0.4
4,238,686	+	yjbA	b4030	0.82	-0.1
4,238,718	+				-0.7
4,238,786	+				-0.5
4,238,786	+				-0.1
4,238,794	-				+0.9
4,238,807	+				-0.2
4,239,030	+	xylE	b4031	0.15	-0.4