Strain Fitness in Escherichia coli BW25113 around b2904

Experiment: Cholinium glutamate 10 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholinium glutamate 10 vol%
3,046,232	-	gcvP	b2903	0.71	+0.2
3,046,281	+	gcvP	b2903	0.73	-0.1
3,046,289	-	gcvP	b2903	0.73	+0.4
3,046,289	-	gcvP	b2903	0.73	-0.1
3,046,305	-	gcvP	b2903	0.74	-0.1
3,046,305	-	gcvP	b2903	0.74	+0.0
3,046,305	-	gcvP	b2903	0.74	+0.4
3,046,305	-	gcvP	b2903	0.74	+0.3
3,046,325	+	gcvP	b2903	0.74	-0.3
3,046,375	+	gcvP	b2903	0.76	+1.1
3,046,636	+	gcvP	b2903	0.85	+0.5
3,046,636	+	gcvP	b2903	0.85	+0.1
3,046,653	-	gcvP	b2903	0.86	-0.3
3,046,659	-	gcvP	b2903	0.86	+0.2
3,046,685	-	gcvP	b2903	0.87	+0.3
3,046,693	+	gcvP	b2903	0.87	+0.2
3,046,693	+	gcvP	b2903	0.87	+0.2
3,046,693	-	gcvP	b2903	0.87	+0.8
3,046,696	-	gcvP	b2903	0.87	+0.7
3,046,706	-	gcvP	b2903	0.88	+0.2
3,046,724	+	gcvP	b2903	0.88	-0.4
3,046,724	+	gcvP	b2903	0.88	-0.2
3,046,733	+	gcvP	b2903	0.88	-1.2
3,046,803	-				-0.7
3,046,848	+				-0.5
3,046,854	-				+0.2
3,046,877	-				+0.5
3,047,124	-				-0.0
3,047,124	-				-0.1
3,047,214	-				+0.3
3,047,214	-				+0.1
3,047,321	+	gcvH	b2904	0.36	+1.0
3,047,321	+	gcvH	b2904	0.36	+0.6
3,047,468	+	gcvH	b2904	0.73	+0.9
3,047,542	+				-0.1
3,047,542	+				+0.2
3,047,684	+				+1.0
3,047,765	+	gcvT	b2905	0.16	+0.0
3,047,796	+	gcvT	b2905	0.18	+0.9
3,047,865	-	gcvT	b2905	0.25	-1.2
3,047,865	-	gcvT	b2905	0.25	+0.3
3,047,871	-	gcvT	b2905	0.25	-0.3
3,047,871	-	gcvT	b2905	0.25	-0.0
3,048,013	+	gcvT	b2905	0.38	-1.0
3,048,057	-	gcvT	b2905	0.42	-1.2
3,048,128	-	gcvT	b2905	0.49	+1.2
3,048,181	-	gcvT	b2905	0.54	-1.1
3,048,181	-	gcvT	b2905	0.54	-0.7
3,048,196	-	gcvT	b2905	0.55	-1.7
3,048,196	-	gcvT	b2905	0.55	+0.0
3,048,231	-	gcvT	b2905	0.58	-1.0
3,048,231	-	gcvT	b2905	0.58	+0.4
3,048,264	-	gcvT	b2905	0.61	-0.4
3,048,306	+	gcvT	b2905	0.65	+0.5
3,048,324	-	gcvT	b2905	0.67	+0.2
3,048,339	+	gcvT	b2905	0.68	+0.3
3,048,339	+	gcvT	b2905	0.68	+0.2
3,048,399	+	gcvT	b2905	0.73	-0.0
3,048,569	+	gcvT	b2905	0.89	+0.2
3,048,569	+	gcvT	b2905	0.89	-0.5