Strain Fitness in Escherichia coli BW25113 around b2829

Experiment: Cholinium glutamate 10 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholinium glutamate 10 vol%
2,963,239	-				+0.0
2,964,140	-				-0.6
2,964,199	-				+0.1
2,964,208	+				-1.9
2,964,210	+				-0.5
2,964,234	+				+0.8
2,964,280	-				+1.0
2,964,296	+				+1.4
2,964,368	+				+2.2
2,964,382	+				+1.4
2,964,382	+				+2.1
2,964,401	+				+1.5
2,964,417	-				+1.3
2,964,419	-				+1.1
2,964,462	-	ptsP	b2829	0.11	+0.7
2,964,524	+	ptsP	b2829	0.14	+1.3
2,964,524	+	ptsP	b2829	0.14	+1.0
2,964,543	-	ptsP	b2829	0.15	+0.7
2,964,575	-	ptsP	b2829	0.16	+1.2
2,964,589	+	ptsP	b2829	0.17	+0.9
2,964,634	-	ptsP	b2829	0.19	+1.5
2,964,653	-	ptsP	b2829	0.20	+0.7
2,964,665	-	ptsP	b2829	0.20	+0.6
2,964,665	-	ptsP	b2829	0.20	+1.2
2,964,775	+	ptsP	b2829	0.25	+1.5
2,964,782	-	ptsP	b2829	0.25	+1.1
2,964,783	-	ptsP	b2829	0.26	+1.3
2,964,825	-	ptsP	b2829	0.27	+1.4
2,964,825	-	ptsP	b2829	0.27	+1.3
2,964,997	-	ptsP	b2829	0.35	+0.9
2,964,998	-	ptsP	b2829	0.35	+0.3
2,965,011	-	ptsP	b2829	0.36	+1.2
2,965,011	-	ptsP	b2829	0.36	+0.9
2,965,081	-	ptsP	b2829	0.39	+1.1
2,965,081	-	ptsP	b2829	0.39	+1.2
2,965,158	-	ptsP	b2829	0.42	+1.3
2,965,249	-	ptsP	b2829	0.46	+1.1
2,965,312	+	ptsP	b2829	0.49	+1.0
2,965,360	-	ptsP	b2829	0.51	+1.0
2,965,360	-	ptsP	b2829	0.51	+1.2
2,965,393	-	ptsP	b2829	0.53	+1.1
2,965,405	-	ptsP	b2829	0.53	+1.2
2,965,443	-	ptsP	b2829	0.55	+1.0
2,965,443	-	ptsP	b2829	0.55	+1.1
2,965,575	-	ptsP	b2829	0.61	+1.3
2,965,575	-	ptsP	b2829	0.61	+1.7
2,965,860	+	ptsP	b2829	0.73	+1.2
2,965,876	+	ptsP	b2829	0.74	+1.2
2,965,910	-	ptsP	b2829	0.76	+1.1
2,965,937	-	ptsP	b2829	0.77	+1.1
2,965,937	-	ptsP	b2829	0.77	+0.5
2,965,968	+	ptsP	b2829	0.78	+0.9
2,965,971	+	ptsP	b2829	0.78	+0.8
2,966,002	+	ptsP	b2829	0.80	+0.0
2,966,055	-	ptsP	b2829	0.82	-0.4
2,966,063	+				+0.3
2,966,063	+	ptsP	b2829	0.82	+2.1
2,966,064	+	ptsP	b2829	0.83	+0.9
2,966,089	-	ptsP	b2829	0.84	-0.2
2,966,089	-	ptsP	b2829	0.84	+0.3
2,966,167	-	ptsP	b2829	0.87	-0.4
2,966,258	+				+1.2
2,966,346	+				+1.4
2,966,346	+				+1.7
2,966,346	-				-0.1
2,966,400	+				+1.6
2,966,459	-				+0.7
2,966,459	-				+0.7
2,966,465	+				+1.7
2,966,467	+				+2.1
2,966,467	+				+0.6
2,966,474	-				-0.1
2,966,484	-				+0.5
2,966,484	-				+0.1
2,966,532	+	nudH	b2830	0.12	+1.5
2,966,565	+	nudH	b2830	0.18	+1.5
2,966,645	+	nudH	b2830	0.33	+2.5
2,966,645	+	nudH	b2830	0.33	+0.9
2,966,722	+	nudH	b2830	0.48	+1.0
2,967,071	+				-0.1
2,967,078	+				+0.1
2,967,078	+				-0.1