Strain Fitness in Escherichia coli BW25113 around b2477
Experiment: Cholinium glutamate 10 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cholinium glutamate 10 vol% |
---|---|---|---|---|---|
remove | |||||
2,594,872 | - | -0.1 | |||
2,594,943 | - | +0.0 | |||
2,594,980 | + | +0.2 | |||
2,595,179 | - | -2.4 | |||
2,595,179 | - | purC | b2476 | 0.35 | +0.4 |
2,595,364 | - | purC | b2476 | 0.61 | -0.1 |
2,595,494 | + | purC | b2476 | 0.79 | -0.5 |
2,595,574 | + | -0.6 | |||
2,595,593 | + | +0.1 | |||
2,595,601 | - | -0.6 | |||
2,595,601 | - | -0.1 | |||
2,595,601 | - | -0.2 | |||
2,595,601 | - | +0.1 | |||
2,595,601 | - | -0.2 | |||
2,595,625 | - | +0.7 | |||
2,595,837 | + | -0.2 | |||
2,595,877 | - | -0.2 | |||
2,595,937 | + | -0.3 | |||
2,595,937 | + | +0.6 | |||
2,595,944 | - | -0.0 | |||
2,595,944 | - | +2.6 | |||
2,595,991 | + | nlpB | b2477 | 0.13 | +0.4 |
2,595,991 | + | nlpB | b2477 | 0.13 | +0.3 |
2,596,206 | + | nlpB | b2477 | 0.34 | +0.5 |
2,596,295 | - | nlpB | b2477 | 0.43 | +2.0 |
2,596,349 | - | nlpB | b2477 | 0.48 | +0.3 |
2,596,439 | - | nlpB | b2477 | 0.57 | -0.6 |
2,596,441 | + | nlpB | b2477 | 0.57 | -0.4 |
2,596,792 | + | +0.8 | |||
2,596,792 | + | +1.4 | |||
2,596,883 | - | +1.2 | |||
2,596,883 | - | +0.1 |
Or see this region's nucleotide sequence