Strain Fitness in Escherichia coli BW25113 around b1205
Experiment: Cholinium glutamate 10 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cholinium glutamate 10 vol% |
---|---|---|---|---|---|
remove | |||||
1,257,756 | + | +0.2 | |||
1,257,756 | + | -0.3 | |||
1,257,756 | + | -0.1 | |||
1,257,957 | + | -0.3 | |||
1,258,135 | - | ychH | b1205 | 0.43 | +1.0 |
1,258,207 | + | ychH | b1205 | 0.69 | +0.9 |
1,258,341 | - | +0.2 | |||
1,258,399 | + | +0.0 | |||
1,258,434 | - | +0.4 | |||
1,258,474 | - | -0.1 | |||
1,258,636 | - | ychM | b1206 | 0.17 | -0.1 |
1,258,636 | - | ychM | b1206 | 0.17 | +0.3 |
1,258,716 | - | ychM | b1206 | 0.22 | +0.1 |
1,258,716 | - | ychM | b1206 | 0.22 | +0.2 |
1,258,860 | + | ychM | b1206 | 0.31 | +0.1 |
1,259,080 | - | ychM | b1206 | 0.44 | -0.0 |
1,259,080 | - | ychM | b1206 | 0.44 | +0.4 |
1,259,171 | - | ychM | b1206 | 0.49 | -0.2 |
1,259,178 | - | ychM | b1206 | 0.49 | -1.1 |
1,259,255 | - | ychM | b1206 | 0.54 | -0.3 |
1,259,273 | + | ychM | b1206 | 0.55 | +0.4 |
Or see this region's nucleotide sequence