Strain Fitness in Escherichia coli BW25113 around b1153

Experiment: Cholinium glutamate 10 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholinium glutamate 10 vol%
1,205,226	-	ymfO	b1151	0.66	-0.0
1,205,226	-	ymfO	b1151	0.66	-0.6
1,205,409	+				-0.1
1,205,409	+				+0.5
1,205,435	-				-0.5
1,205,437	-				-1.5
1,205,474	+	ymfP	b1152	0.14	+0.1
1,205,474	+	ymfP	b1152	0.14	+0.3
1,205,630	+	ymfP	b1152	0.34	-0.4
1,205,661	-	ymfP	b1152	0.38	+0.2
1,205,709	-	ymfP	b1152	0.44	-0.8
1,205,740	-	ymfP	b1152	0.48	-0.9
1,205,869	-	ymfP	b1152	0.64	-0.4
1,206,162	-				-0.4
1,206,273	+	ymfQ	b1153	0.23	-0.4
1,206,457	+	ymfQ	b1153	0.55	+0.9
1,206,660	-	ymfQ	b1153	0.90	+0.5
1,206,672	-				-0.2
1,207,069	+	ycfK	b1154	0.55	+0.4
1,207,070	+	ycfK	b1154	0.55	+0.0
1,207,076	+	ycfK	b1154	0.56	+0.6
1,207,084	-	ycfK	b1154	0.57	+1.3
1,207,097	+	ycfK	b1154	0.59	+0.7
1,207,147	+	ycfK	b1154	0.67	-0.1
1,207,155	+	ycfK	b1154	0.68	+1.0
1,207,156	+	ycfK	b1154	0.69	-0.4
1,207,164	+	ycfK	b1154	0.70	+1.0
1,207,169	+	ycfK	b1154	0.71	-0.4
1,207,177	+	ycfK	b1154	0.72	+0.9
1,207,177	+	ycfK	b1154	0.72	+0.5
1,207,192	+	ycfK	b1154	0.74	+0.2
1,207,246	+	ycfK	b1154	0.83	+0.5
1,207,248	+	ycfK	b1154	0.83	-0.3
1,207,248	+	ycfK	b1154	0.83	+0.4
1,207,258	+	ycfK	b1154	0.85	+0.5
1,207,258	+	ycfK	b1154	0.85	-0.7
1,207,260	+	ycfK	b1154	0.85	+0.2
1,207,267	+	ycfK	b1154	0.86	+0.7
1,207,270	+	ycfK	b1154	0.87	+0.7
1,207,291	+				-0.3
1,207,291	+				-0.1
1,207,339	+				+0.1
1,207,390	+				-0.1
1,207,390	+				-0.5
1,207,540	-	ymfS	b1155	0.45	+0.0
1,207,545	-	ymfS	b1155	0.46	-1.2
1,207,563	+	ymfS	b1155	0.50	-1.3
1,207,605	+	ymfS	b1155	0.60	+1.3
1,207,617	+	ymfS	b1155	0.63	+1.3
1,207,617	+	ymfS	b1155	0.63	+1.7
1,207,624	-	ymfS	b1155	0.65	+0.0
1,207,624	-	ymfS	b1155	0.65	-0.6
1,207,626	+	ymfS	b1155	0.65	+0.1
1,207,633	+	ymfS	b1155	0.67	-0.5
1,207,649	-	ymfS	b1155	0.71	-0.6
1,207,681	+	ymfS	b1155	0.79	-0.6
1,207,703	-	ymfS	b1155	0.84	+1.0