Strain Fitness in Escherichia coli BW25113 around b0294

Experiment: Cholinium glutamate 10 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholinium glutamate 10 vol%
308,984	+	yagY	b0292	0.60	-0.0
309,053	-	yagY	b0292	0.70	-0.5
309,149	+	yagY	b0292	0.85	-0.6
309,158	-	yagY	b0292	0.86	+0.2
309,166	-	yagY	b0292	0.87	+0.7
309,300	-				-0.1
309,312	-				+0.2
309,370	-	yagZ	b0293	0.11	+0.1
309,370	-	yagZ	b0293	0.11	-0.6
309,401	-	yagZ	b0293	0.16	-0.1
309,401	-	yagZ	b0293	0.16	+0.5
309,435	-	yagZ	b0293	0.22	-0.3
309,515	-	yagZ	b0293	0.35	-0.3
309,532	-	yagZ	b0293	0.38	+1.0
309,552	+	yagZ	b0293	0.41	+0.1
309,583	-	yagZ	b0293	0.47	+0.3
309,597	+	yagZ	b0293	0.49	-0.0
309,609	+	yagZ	b0293	0.51	+0.9
309,609	+	yagZ	b0293	0.51	-0.9
309,630	+	yagZ	b0293	0.55	+0.2
309,640	+	yagZ	b0293	0.56	-0.0
309,657	+	yagZ	b0293	0.59	-0.2
309,673	-	yagZ	b0293	0.62	-0.1
309,726	+	yagZ	b0293	0.71	+0.0
309,778	+	yagZ	b0293	0.80	-1.2
309,778	+	yagZ	b0293	0.80	+0.3
309,800	+	yagZ	b0293	0.84	+1.0
309,804	+	yagZ	b0293	0.84	-0.2
309,819	+	yagZ	b0293	0.87	-0.5
309,822	-	yagZ	b0293	0.87	-0.3
309,839	-				+0.6
309,839	-				-0.5
309,841	+				-0.3
309,847	+				-0.3
309,870	+				+0.1
309,934	-				-0.8
309,938	-				+1.5
309,961	+				-1.0
309,961	+				+1.5
310,001	+				+1.5
310,001	+				+0.5
310,006	+				+1.5
310,013	+				+1.5
310,013	+				+1.5
310,013	+				+0.5
310,021	-				+0.8
310,028	+				+1.5
310,029	-	ykgK	b0294	0.10	+0.7
310,033	-	ykgK	b0294	0.11	+1.1
310,035	-	ykgK	b0294	0.11	-0.0
310,035	-	ykgK	b0294	0.11	-0.0
310,035	-	ykgK	b0294	0.11	+2.1
310,035	-	ykgK	b0294	0.11	-0.7
310,044	-	ykgK	b0294	0.13	+1.3
310,044	-	ykgK	b0294	0.13	+0.6
310,102	+	ykgK	b0294	0.22	+1.5
310,219	-	ykgK	b0294	0.42	+1.5
310,219	-	ykgK	b0294	0.42	+1.5
310,434	-	ykgK	b0294	0.79	+1.5
310,459	-	ykgK	b0294	0.83	+1.5
310,646	-				+1.5
310,829	+				+1.5
310,880	-				+1.5
310,891	-				+1.5
310,891	-				+1.5
310,892	-				+1.5
310,892	-				+0.5
310,894	-				+1.5
310,904	-				+1.5
311,087	-				+1.5
311,091	-				-0.5
311,100	+				-1.5
311,100	+				-0.0
311,114	-				+1.5
311,138	-				+1.2
311,172	-				+1.2
311,172	-				+1.3
311,194	-				+1.1
311,222	-				+0.5
311,222	-				+0.5
311,256	+				+0.6
311,260	+				-0.0
311,260	+				-0.0
311,352	+				+0.0
311,360	+	ykgL	b0295	0.11	-0.3
311,360	+	ykgL	b0295	0.11	+0.7
311,364	-	ykgL	b0295	0.12	+0.5
311,370	+	ykgL	b0295	0.15	+0.3
311,380	+	ykgL	b0295	0.19	+0.1
311,385	+	ykgL	b0295	0.21	+0.1
311,385	+	ykgL	b0295	0.21	+0.3
311,396	+	ykgL	b0295	0.26	-0.3
311,396	+	ykgL	b0295	0.26	+0.5
311,402	+	ykgL	b0295	0.29	+0.0
311,402	+	ykgL	b0295	0.29	-0.1
311,418	-	ykgL	b0295	0.36	+2.5
311,470	+	ykgL	b0295	0.59	+0.0
311,470	+	ykgL	b0295	0.59	+0.4
311,525	+	ykgL	b0295	0.83	+1.5