Strain Fitness in Escherichia coli BW25113 around b1772

Experiment: Cholinium lysinate 10 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholinium lysinate 10 vol%
1,853,029	-				+0.2
1,853,029	-				-1.9
1,853,048	-				+0.5
1,853,102	+				-0.0
1,853,110	-				-0.0
1,853,170	+	ydjG	b1771	0.16	+1.1
1,853,192	-	ydjG	b1771	0.18	-1.1
1,853,368	-	ydjG	b1771	0.36	-0.5
1,853,425	-	ydjG	b1771	0.42	-0.0
1,853,425	-	ydjG	b1771	0.42	+0.3
1,853,448	+	ydjG	b1771	0.44	-2.2
1,853,537	-	ydjG	b1771	0.53	+0.2
1,853,621	-	ydjG	b1771	0.62	+0.4
1,853,621	-	ydjG	b1771	0.62	-0.8
1,853,666	-	ydjG	b1771	0.66	+0.4
1,853,666	-	ydjG	b1771	0.66	+0.4
1,853,751	+	ydjG	b1771	0.75	+1.0
1,853,763	-	ydjG	b1771	0.76	-0.2
1,853,919	-				+0.1
1,853,937	-				-0.8
1,853,947	-				+1.3
1,854,143	-	b1772	b1772	0.15	+0.1
1,854,143	-	b1772	b1772	0.15	+1.5
1,854,178	-	b1772	b1772	0.18	-0.4
1,854,178	-	b1772	b1772	0.18	+0.2
1,854,223	-	b1772	b1772	0.23	-1.1
1,854,246	-	b1772	b1772	0.25	+0.0
1,854,321	-	b1772	b1772	0.33	-0.6
1,854,389	+	b1772	b1772	0.41	+1.0
1,854,397	-	b1772	b1772	0.41	+1.0
1,854,425	-	b1772	b1772	0.44	+0.5
1,854,425	-	b1772	b1772	0.44	+0.6
1,854,461	-	b1772	b1772	0.48	+1.0
1,854,461	-	b1772	b1772	0.48	-1.3
1,854,550	-	b1772	b1772	0.57	+1.0
1,854,626	+	b1772	b1772	0.66	+1.0
1,854,626	+	b1772	b1772	0.66	+1.0
1,854,644	-	b1772	b1772	0.67	+0.0
1,854,644	-	b1772	b1772	0.67	+1.0
1,854,651	+	b1772	b1772	0.68	+1.0
1,854,652	+	b1772	b1772	0.68	+1.0
1,854,670	+	b1772	b1772	0.70	+1.0
1,854,670	+	b1772	b1772	0.70	+1.0
1,854,935	-				+1.0
1,854,935	-				+1.0
1,855,036	-				-0.1
1,855,081	-	ydjI	b1773	0.15	+0.4
1,855,087	-	ydjI	b1773	0.16	+1.0
1,855,097	-	ydjI	b1773	0.17	+1.0
1,855,184	-	ydjI	b1773	0.27	-0.6
1,855,298	-	ydjI	b1773	0.41	+1.0
1,855,333	+	ydjI	b1773	0.45	+1.0
1,855,336	+	ydjI	b1773	0.45	-0.6
1,855,336	+	ydjI	b1773	0.45	-1.0
1,855,341	+	ydjI	b1773	0.46	+1.0
1,855,378	+	ydjI	b1773	0.50	+1.0
1,855,403	+	ydjI	b1773	0.53	+1.0
1,855,411	+	ydjI	b1773	0.54	+1.0
1,855,525	+	ydjI	b1773	0.68	+1.0
1,855,550	+	ydjI	b1773	0.71	+1.0
1,855,591	+	ydjI	b1773	0.76	+1.0
1,855,593	+	ydjI	b1773	0.76	+0.0
1,855,593	+	ydjI	b1773	0.76	-1.0
1,855,868	-				+0.6
1,855,880	-				-0.5
1,855,890	-				-0.2
1,855,890	-				+0.4
1,855,907	-				-2.0
1,855,944	-	ydjJ	b1774	0.12	+1.4
1,855,944	-	ydjJ	b1774	0.12	-0.3