Strain Fitness in Escherichia coli BW25113 around b4197

Experiment: Cholinium dihydrogen phosphate 10 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholinium dihydrogen phosphate 10 vol%
4,419,869	+	ulaC	b4195	0.30	+0.4
4,419,869	+	ulaC	b4195	0.30	-1.5
4,419,924	-	ulaC	b4195	0.42	+1.1
4,419,929	-	ulaC	b4195	0.43	-0.7
4,419,947	-	ulaC	b4195	0.46	+0.3
4,420,137	+	ulaC	b4195	0.87	-0.1
4,420,164	+				-0.1
4,420,164	+				-1.2
4,420,206	+				-0.2
4,420,355	-	ulaD	b4196	0.22	-0.6
4,420,363	+	ulaD	b4196	0.24	+0.9
4,420,386	-	ulaD	b4196	0.27	+0.3
4,420,479	+	ulaD	b4196	0.41	+0.0
4,420,533	+	ulaD	b4196	0.50	+0.1
4,420,641	+	ulaD	b4196	0.66	+0.1
4,420,719	+	ulaD	b4196	0.78	-0.5
4,420,719	+	ulaD	b4196	0.78	-0.2
4,420,769	+	ulaD	b4196	0.86	-0.8
4,420,848	-				+0.8
4,420,898	+				-1.5
4,420,898	+				+0.3
4,421,038	+	ulaE	b4197	0.20	+0.5
4,421,046	-	ulaE	b4197	0.21	-0.6
4,421,046	-	ulaE	b4197	0.21	-0.9
4,421,148	-	ulaE	b4197	0.33	+0.2
4,421,156	+	ulaE	b4197	0.34	-0.8
4,421,210	-	ulaE	b4197	0.40	+0.1
4,421,210	-	ulaE	b4197	0.40	+0.2
4,421,354	-	ulaE	b4197	0.57	-0.8
4,421,354	-	ulaE	b4197	0.57	-0.1
4,421,387	-	ulaE	b4197	0.61	-0.2
4,421,387	-	ulaE	b4197	0.61	+0.6
4,421,449	+	ulaE	b4197	0.68	+0.1
4,421,459	-	ulaE	b4197	0.69	-0.1
4,421,471	-	ulaE	b4197	0.70	-0.1
4,421,496	+				+0.0
4,421,764	-				-0.2
4,421,811	-	ulaF	b4198	0.13	+0.6
4,421,811	-	ulaF	b4198	0.13	+0.3
4,421,866	-	ulaF	b4198	0.21	+0.3
4,421,996	+	ulaF	b4198	0.40	+0.5
4,421,996	+	ulaF	b4198	0.40	+0.8
4,422,095	-	ulaF	b4198	0.54	+0.7
4,422,095	-	ulaF	b4198	0.54	-0.3
4,422,097	+	ulaF	b4198	0.54	-0.5
4,422,133	-	ulaF	b4198	0.60	+0.2
4,422,133	-	ulaF	b4198	0.60	+0.6
4,422,188	-	ulaF	b4198	0.68	+0.3
4,422,188	-	ulaF	b4198	0.68	+1.0
4,422,212	-	ulaF	b4198	0.71	+0.9
4,422,212	-	ulaF	b4198	0.71	-1.7
4,422,229	+	ulaF	b4198	0.74	+0.8
4,422,229	+	ulaF	b4198	0.74	+0.5
4,422,321	+	ulaF	b4198	0.87	-0.2
4,422,321	+	ulaF	b4198	0.87	-0.3
4,422,326	+	ulaF	b4198	0.88	+0.2
4,422,326	+	ulaF	b4198	0.88	+0.1
4,422,331	+	ulaF	b4198	0.89	+0.2
4,422,337	-	ulaF	b4198	0.89	-0.0
4,422,403	+				+0.4
4,422,439	+				-0.1
4,422,447	-				+0.7
4,422,450	+				-0.1
4,422,458	-				+0.3
4,422,458	-				+0.1
4,422,486	+				-0.0
4,422,508	-				-0.2
4,422,527	-				-0.7
4,422,533	-				+0.4
4,422,543	-				+0.1
4,422,565	+				-1.2
4,422,568	-	yjfY	b4199	0.11	-0.8
4,422,592	-	yjfY	b4199	0.19	-0.4
4,422,598	+	yjfY	b4199	0.21	-0.6
4,422,598	+	yjfY	b4199	0.21	-0.3
4,422,606	+	yjfY	b4199	0.24	-1.0
4,422,606	+	yjfY	b4199	0.24	+0.0
4,422,608	+	yjfY	b4199	0.25	+1.3
4,422,608	+	yjfY	b4199	0.25	-0.2
4,422,608	+	yjfY	b4199	0.25	-2.2
4,422,614	-	yjfY	b4199	0.27	-0.2
4,422,614	-	yjfY	b4199	0.27	-0.5
4,422,616	-	yjfY	b4199	0.28	-0.1
4,422,616	-	yjfY	b4199	0.28	-0.5
4,422,616	-	yjfY	b4199	0.28	+0.5
4,422,616	-	yjfY	b4199	0.28	+0.3
4,422,616	-	yjfY	b4199	0.28	+0.1
4,422,616	-	yjfY	b4199	0.28	-0.8
4,422,626	-	yjfY	b4199	0.32	-0.2
4,422,642	+	yjfY	b4199	0.37	-0.2
4,422,642	+	yjfY	b4199	0.37	-0.4
4,422,655	-	yjfY	b4199	0.42	+0.3
4,422,660	-	yjfY	b4199	0.44	+0.5
4,422,660	-	yjfY	b4199	0.44	+0.8
4,422,669	-	yjfY	b4199	0.47	+0.1
4,422,687	+	yjfY	b4199	0.54	-0.2
4,422,704	+	yjfY	b4199	0.60	-0.2
4,422,704	+	yjfY	b4199	0.60	-0.4
4,422,705	-	yjfY	b4199	0.60	-0.6