Strain Fitness in Escherichia coli BW25113 around b4557
Experiment: e-Amino-N-Caproic Acid 10 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | e-Amino-N-Caproic Acid 10 vol% |
---|---|---|---|---|---|
remove | |||||
3,881,847 | - | -0.1 | |||
3,881,847 | - | +0.3 | |||
3,881,884 | - | -0.6 | |||
3,881,914 | + | -1.1 | |||
3,881,932 | - | +0.4 | |||
3,881,959 | + | -0.1 | |||
3,881,972 | - | +0.6 | |||
3,881,976 | + | -0.2 | |||
3,882,000 | - | +3.1 | |||
3,882,000 | - | +1.1 | |||
3,882,009 | - | +0.5 | |||
3,882,088 | + | +0.7 | |||
3,882,097 | - | -0.4 | |||
3,882,110 | + | -0.5 | |||
3,882,110 | + | +1.2 | |||
3,882,118 | - | +1.9 | |||
3,882,118 | - | +0.3 | |||
3,882,120 | - | -0.5 | |||
3,882,163 | + | +0.1 | |||
3,882,172 | - | -1.7 | |||
3,882,876 | - | yidD | b4557 | 0.14 | +2.7 |
3,882,876 | - | yidD | b4557 | 0.14 | +1.8 |
3,882,883 | + | yidD | b4557 | 0.17 | +0.2 |
3,882,901 | + | yidD | b4557 | 0.24 | -0.1 |
3,882,901 | - | yidD | b4557 | 0.24 | +4.1 |
3,882,902 | - | yidD | b4557 | 0.24 | +4.7 |
3,882,941 | - | yidD | b4557 | 0.40 | +2.1 |
3,882,960 | + | yidD | b4557 | 0.47 | -0.3 |
3,882,978 | + | yidD | b4557 | 0.54 | +0.7 |
3,883,034 | + | yidD | b4557 | 0.76 | -0.0 |
3,883,034 | + | yidD | b4557 | 0.76 | +1.1 |
Or see this region's nucleotide sequence