Strain Fitness in Escherichia coli BW25113 around b4543

Experiment: e-Amino-N-Caproic Acid 10 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	e-Amino-N-Caproic Acid 10 vol%
2,354,892	-				+0.1
2,354,926	-				+1.9
2,354,926	-				-0.1
2,354,941	-				-1.3
2,354,941	-				-0.3
2,355,020	+	yfaD	b2244	0.10	+0.0
2,355,149	+	yfaD	b2244	0.25	+0.8
2,355,322	-	yfaD	b2244	0.44	-0.5
2,355,322	-	yfaD	b2244	0.44	+0.0
2,355,322	-	yfaD	b2244	0.44	-0.5
2,355,369	+	yfaD	b2244	0.49	-0.2
2,355,396	+	yfaD	b2244	0.52	+0.2
2,355,438	+	yfaD	b2244	0.57	+0.7
2,355,438	+	yfaD	b2244	0.57	+1.1
2,355,448	+	yfaD	b2244	0.58	-0.1
2,355,448	+	yfaD	b2244	0.58	-0.3
2,355,448	+	yfaD	b2244	0.58	+0.2
2,355,499	+	yfaD	b2244	0.64	-0.0
2,355,665	-	yfaD	b2244	0.82	-0.1
2,355,795	-				-0.7
2,355,795	-				+0.3
2,355,800	-				-1.9
2,355,908	+	ypaA	b4543	0.38	+0.5
2,355,908	+	ypaA	b4543	0.38	+0.5
2,355,941	+	ypaA	b4543	0.55	+0.7
2,355,949	-	ypaA	b4543	0.60	-0.1
2,356,063	+				-0.4
2,356,063	+				-1.6
2,356,103	+				-0.5
2,356,137	+				-0.2
2,356,137	+				-0.5
2,356,137	+				-0.8
2,356,144	-				-0.2
2,356,196	-	yfaU	b2245	0.16	-0.9
2,356,196	-	yfaU	b2245	0.16	-0.1
2,356,203	+	yfaU	b2245	0.17	+0.1
2,356,211	-	yfaU	b2245	0.18	-0.0
2,356,211	-	yfaU	b2245	0.18	+0.3
2,356,220	-	yfaU	b2245	0.19	-0.2
2,356,220	-	yfaU	b2245	0.19	+0.1
2,356,313	+	yfaU	b2245	0.31	-0.1
2,356,313	+	yfaU	b2245	0.31	+0.0
2,356,386	+	yfaU	b2245	0.40	+0.1
2,356,389	-	yfaU	b2245	0.40	+0.1
2,356,413	+	yfaU	b2245	0.43	+2.0
2,356,491	+	yfaU	b2245	0.53	+1.0
2,356,496	+	yfaU	b2245	0.54	-0.5
2,356,538	-	yfaU	b2245	0.59	+0.2
2,356,649	+	yfaU	b2245	0.73	-0.4
2,356,657	-	yfaU	b2245	0.74	+0.0
2,356,657	-	yfaU	b2245	0.74	+0.0
2,356,702	+	yfaU	b2245	0.79	-0.4
2,356,734	-	yfaU	b2245	0.83	+0.7
2,356,734	-	yfaU	b2245	0.83	-0.5
2,356,848	+				+0.9
2,356,848	+				-0.2
2,356,850	+				-0.1
2,356,850	+				+0.0
2,356,858	-				+0.8
2,356,858	-				-0.7
2,356,867	-				-0.1
2,356,890	+				-0.2
2,356,890	+				+0.5
2,356,891	-				-0.7
2,356,891	-				-0.0