Strain Fitness in Escherichia coli BW25113 around b2531
Experiment: 1-Pentanol 0.5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 1-Pentanol 0.5 vol% |
---|---|---|---|---|---|
remove | |||||
2,659,636 | - | +2.6 | |||
2,659,636 | - | -1.3 | |||
2,659,684 | - | +1.0 | |||
2,659,834 | - | iscR | b2531 | 0.35 | +3.3 |
2,659,875 | - | iscR | b2531 | 0.43 | -0.2 |
2,659,897 | - | iscR | b2531 | 0.47 | +1.4 |
2,660,133 | - | -0.3 | |||
2,660,376 | + | -0.2 | |||
2,660,376 | + | +0.1 | |||
2,660,376 | + | -0.5 | |||
2,660,376 | + | +0.3 | |||
2,660,475 | - | +0.9 | |||
2,660,558 | + | -0.7 | |||
2,661,004 | + | yfhQ | b2532 | 0.54 | -0.1 |
2,661,004 | + | yfhQ | b2532 | 0.54 | +0.4 |
2,661,012 | - | yfhQ | b2532 | 0.55 | +0.1 |
2,661,023 | - | yfhQ | b2532 | 0.56 | +0.2 |
2,661,088 | - | yfhQ | b2532 | 0.65 | -0.3 |
Or see this region's nucleotide sequence