Strain Fitness in Escherichia coli BW25113 around b1891
Experiment: 1-Pentanol 0.5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 1-Pentanol 0.5 vol% |
---|---|---|---|---|---|
remove | |||||
1,974,414 | + | motA | b1890 | 0.16 | +0.3 |
1,974,854 | - | motA | b1890 | 0.65 | +0.0 |
1,974,934 | + | motA | b1890 | 0.74 | +0.1 |
1,974,934 | + | motA | b1890 | 0.74 | -0.3 |
1,975,040 | + | motA | b1890 | 0.86 | -0.4 |
1,975,092 | + | +0.6 | |||
1,975,093 | - | +0.5 | |||
1,975,173 | + | +0.1 | |||
1,975,179 | + | -0.9 | |||
1,975,179 | + | +0.1 | |||
1,975,415 | - | flhC | b1891 | 0.22 | +0.1 |
1,975,477 | + | flhC | b1891 | 0.32 | +0.1 |
1,975,589 | + | flhC | b1891 | 0.52 | +0.7 |
1,975,636 | + | flhC | b1891 | 0.60 | +0.8 |
1,975,707 | + | flhC | b1891 | 0.72 | +0.0 |
1,975,914 | - | flhD | b1892 | 0.12 | +0.0 |
1,975,961 | - | flhD | b1892 | 0.26 | +0.5 |
1,975,961 | - | flhD | b1892 | 0.26 | -0.0 |
1,975,991 | + | flhD | b1892 | 0.34 | +0.2 |
1,975,991 | - | flhD | b1892 | 0.34 | +0.2 |
1,976,072 | + | flhD | b1892 | 0.57 | +0.2 |
1,976,072 | + | flhD | b1892 | 0.57 | +0.3 |
1,976,072 | + | flhD | b1892 | 0.57 | -0.2 |
1,976,120 | + | flhD | b1892 | 0.71 | -0.1 |
1,976,120 | + | flhD | b1892 | 0.71 | -0.6 |
1,976,138 | + | flhD | b1892 | 0.76 | -0.6 |
1,976,146 | - | flhD | b1892 | 0.78 | +0.4 |
1,976,149 | - | flhD | b1892 | 0.79 | -2.2 |
1,976,149 | - | flhD | b1892 | 0.79 | -1.4 |
1,976,221 | - | +0.2 | |||
1,976,226 | - | -1.5 | |||
1,976,226 | - | -0.2 | |||
1,976,259 | + | -0.7 | |||
1,976,262 | + | -1.4 | |||
1,976,272 | + | -0.5 | |||
1,976,281 | + | -0.4 | |||
1,976,354 | - | -0.2 | |||
1,976,387 | + | +0.5 | |||
1,976,396 | - | +0.5 | |||
1,976,432 | - | -0.8 | |||
1,976,436 | + | -0.0 | |||
1,976,439 | + | +0.2 | |||
1,976,439 | + | -0.4 | |||
1,976,439 | + | +0.1 | |||
1,976,439 | + | +0.4 | |||
1,976,444 | + | -1.6 | |||
1,976,447 | - | +1.0 | |||
1,976,447 | - | +0.5 | |||
1,976,447 | - | +0.3 | |||
1,976,447 | - | -1.2 | |||
1,976,448 | + | -0.2 | |||
1,976,452 | - | -0.4 | |||
1,976,452 | - | -0.4 | |||
1,976,453 | + | +0.6 | |||
1,976,454 | - | +0.3 | |||
1,976,455 | - | -0.8 | |||
1,976,460 | - | -0.9 | |||
1,976,514 | - | +0.8 |
Or see this region's nucleotide sequence