Strain Fitness in Escherichia coli BW25113 around b4651
Experiment: Caprolactam 7 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Caprolactam 7 vol% |
---|---|---|---|---|---|
remove | |||||
3,765,985 | - | yibJ | b3595 | 0.78 | +0.9 |
3,765,994 | - | yibJ | b3595 | 0.79 | +1.9 |
3,765,994 | - | yibJ | b3595 | 0.79 | +1.9 |
3,765,994 | - | yibJ | b3595 | 0.79 | +1.9 |
3,765,996 | - | yibJ | b3595 | 0.80 | +1.9 |
3,766,001 | - | yibJ | b3595 | 0.80 | +1.9 |
3,766,005 | - | yibJ | b3595 | 0.81 | +1.9 |
3,766,117 | + | +1.9 | |||
3,766,691 | + | yibS | b4650 | 0.12 | +1.9 |
3,766,713 | - | yibS | b4650 | 0.20 | +1.9 |
3,766,715 | + | yibS | b4650 | 0.21 | +1.9 |
3,766,715 | + | yibS | b4650 | 0.21 | +1.9 |
3,766,718 | + | yibS | b4650 | 0.22 | +1.9 |
3,766,754 | - | yibS | b4650 | 0.37 | +0.9 |
3,766,757 | + | yibS | b4650 | 0.38 | +1.9 |
3,766,773 | - | yibS | b4650 | 0.44 | +1.9 |
3,766,780 | + | yibS | b4650 | 0.47 | +1.9 |
3,766,780 | + | yibS | b4650 | 0.47 | +1.9 |
3,766,840 | + | yibS | b4650 | 0.71 | +0.4 |
3,766,840 | + | yibS | b4650 | 0.71 | -0.4 |
3,766,840 | + | yibS | b4650 | 0.71 | +0.4 |
3,766,840 | + | yibS | b4650 | 0.71 | +0.4 |
3,766,841 | + | yibS | b4650 | 0.71 | +0.8 |
3,766,856 | + | yibS | b4650 | 0.77 | +0.4 |
3,766,858 | + | yibS | b4650 | 0.78 | +0.4 |
3,766,858 | + | yibS | b4650 | 0.78 | +1.9 |
3,766,858 | + | yibS | b4650 | 0.78 | +0.9 |
3,766,859 | + | yibS | b4650 | 0.78 | +0.4 |
3,766,878 | + | yibS | b4650 | 0.86 | +0.9 |
3,766,878 | + | yibS | b4650 | 0.86 | +0.6 |
3,766,892 | + | -0.1 | |||
3,766,900 | + | -1.4 | |||
3,766,903 | + | +1.9 | |||
3,766,903 | + | -0.4 | |||
3,766,932 | + | yibW | b4651 | 0.20 | +1.9 |
3,766,935 | + | yibW | b4651 | 0.24 | +1.9 |
3,767,931 | - | +1.9 | |||
3,767,931 | - | +0.9 | |||
3,767,938 | - | +0.9 |
Or see this region's nucleotide sequence