Strain Fitness in Escherichia coli BW25113 around b4520
Experiment: Caprolactam 7 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Caprolactam 7 vol% |
---|---|---|---|---|---|
remove | |||||
1,217,360 | - | b1168 | b1168 | 0.53 | +0.9 |
1,217,640 | - | b1168 | b1168 | 0.71 | -1.6 |
1,217,667 | - | b1168 | b1168 | 0.73 | -0.1 |
1,217,690 | - | b1168 | b1168 | 0.75 | -0.6 |
1,217,692 | - | b1168 | b1168 | 0.75 | +1.7 |
1,217,764 | + | b1168 | b1168 | 0.80 | +0.9 |
1,217,764 | + | b1168 | b1168 | 0.80 | -0.1 |
1,217,767 | - | b1168 | b1168 | 0.80 | +0.9 |
1,217,856 | - | b1168 | b1168 | 0.86 | +0.9 |
1,217,861 | - | b1168 | b1168 | 0.86 | +0.9 |
1,217,891 | - | b1168 | b1168 | 0.88 | +0.9 |
1,217,891 | - | b1168 | b1168 | 0.88 | +0.9 |
1,217,891 | - | b1168 | b1168 | 0.88 | +0.9 |
1,218,016 | + | +0.9 | |||
1,218,089 | + | -1.4 | |||
1,218,096 | + | -0.1 | |||
1,218,242 | - | ymgF | b4520 | 0.16 | +1.9 |
1,218,284 | - | ymgF | b4520 | 0.36 | -0.1 |
1,218,286 | - | ymgF | b4520 | 0.37 | +0.7 |
1,218,301 | + | ymgF | b4520 | 0.43 | +0.9 |
1,218,309 | - | ymgF | b4520 | 0.47 | +1.9 |
1,218,311 | + | ymgF | b4520 | 0.48 | +0.9 |
1,218,405 | + | +0.5 | |||
1,218,414 | - | -0.4 | |||
1,218,446 | + | +0.9 | |||
1,218,450 | - | +0.9 | |||
1,218,450 | - | -1.1 | |||
1,218,454 | - | -0.1 | |||
1,218,454 | - | +0.9 | |||
1,218,468 | - | +0.9 | |||
1,218,472 | - | -0.6 | |||
1,218,478 | + | +0.9 | |||
1,218,523 | + | +1.9 |
Or see this region's nucleotide sequence