Strain Fitness in Escherichia coli BW25113 around b3744

Experiment: Caprolactam 7 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Caprolactam 7 vol%
3,924,205	+	mioC	b3742	0.38	-1.0
3,924,206	+	mioC	b3742	0.39	-0.9
3,924,206	+	mioC	b3742	0.39	-0.9
3,924,307	+	mioC	b3742	0.61	-0.7
3,924,323	-	mioC	b3742	0.65	-0.7
3,924,330	-	mioC	b3742	0.66	-0.4
3,924,447	-				+0.8
3,924,458	+				+0.6
3,924,458	+				+0.1
3,924,465	+				-0.1
3,924,471	-				-0.6
3,924,507	+				+0.0
3,924,507	+				-0.8
3,924,507	+				-0.3
3,924,515	+				+0.1
3,924,515	-				-0.6
3,924,515	-				-0.1
3,924,515	-				-0.1
3,924,525	-				-0.7
3,924,530	+				+0.2
3,924,664	+	asnC	b3743	0.21	-0.7
3,924,668	-	asnC	b3743	0.22	+0.4
3,924,668	-	asnC	b3743	0.22	-0.2
3,924,672	-	asnC	b3743	0.23	-0.1
3,924,696	+	asnC	b3743	0.28	-0.3
3,924,696	+	asnC	b3743	0.28	-0.8
3,924,708	-	asnC	b3743	0.31	-0.5
3,924,720	-	asnC	b3743	0.33	+0.1
3,924,720	-	asnC	b3743	0.33	-0.1
3,924,720	-	asnC	b3743	0.33	-0.5
3,924,722	+	asnC	b3743	0.34	-0.4
3,924,730	-	asnC	b3743	0.35	-0.2
3,924,730	-	asnC	b3743	0.35	+0.4
3,924,742	-	asnC	b3743	0.38	+0.5
3,924,742	-	asnC	b3743	0.38	-0.3
3,924,793	-	asnC	b3743	0.49	+0.1
3,924,796	+	asnC	b3743	0.50	-0.1
3,924,823	-	asnC	b3743	0.56	-0.5
3,924,840	+	asnC	b3743	0.59	-0.1
3,924,850	-	asnC	b3743	0.61	+1.0
3,924,852	+	asnC	b3743	0.62	-0.8
3,924,860	-	asnC	b3743	0.64	-0.4
3,924,904	+	asnC	b3743	0.73	+0.0
3,924,911	+	asnC	b3743	0.75	+0.8
3,924,911	+	asnC	b3743	0.75	-0.0
3,924,923	-	asnC	b3743	0.77	+0.1
3,924,965	+	asnC	b3743	0.86	-0.4
3,924,990	-				-0.7
3,925,206	+				-0.6
3,925,206	+				-0.1
3,925,210	+				+1.0
3,925,254	+				-0.7
3,925,301	-	asnA	b3744	0.12	+0.5
3,925,301	-	asnA	b3744	0.12	-0.2
3,925,301	-	asnA	b3744	0.12	-0.3
3,925,305	-	asnA	b3744	0.13	+0.2
3,925,312	+	asnA	b3744	0.13	+0.1
3,925,312	+	asnA	b3744	0.13	+0.9
3,925,312	+	asnA	b3744	0.13	-0.6
3,925,320	-	asnA	b3744	0.14	+0.5
3,925,320	-	asnA	b3744	0.14	-0.4
3,925,320	-	asnA	b3744	0.14	-0.2
3,925,348	-	asnA	b3744	0.17	-0.4
3,925,358	+	asnA	b3744	0.18	+0.4
3,925,388	-	asnA	b3744	0.21	+0.1
3,925,411	+	asnA	b3744	0.23	+1.5
3,925,417	-	asnA	b3744	0.24	-0.6
3,925,443	+	asnA	b3744	0.27	+0.5
3,925,443	+	asnA	b3744	0.27	-0.3
3,925,458	-	asnA	b3744	0.28	+0.9
3,925,462	-	asnA	b3744	0.29	+0.4
3,925,470	-	asnA	b3744	0.29	-0.1
3,925,470	-	asnA	b3744	0.29	-0.2
3,925,489	-	asnA	b3744	0.31	-0.1
3,925,520	+	asnA	b3744	0.34	-1.0
3,925,536	-	asnA	b3744	0.36	-0.5
3,925,543	-	asnA	b3744	0.37	-0.5
3,925,592	-	asnA	b3744	0.42	+0.1
3,925,592	-	asnA	b3744	0.42	-1.1
3,925,606	+	asnA	b3744	0.43	-0.1
3,925,607	-	asnA	b3744	0.43	-0.3
3,925,632	+	asnA	b3744	0.46	-0.0
3,925,632	+	asnA	b3744	0.46	-1.6
3,925,637	-	asnA	b3744	0.46	+0.0
3,925,644	+	asnA	b3744	0.47	+0.1
3,925,675	+	asnA	b3744	0.50	-1.0
3,925,675	+	asnA	b3744	0.50	-0.3
3,925,684	-	asnA	b3744	0.51	-0.0
3,925,686	+	asnA	b3744	0.51	+0.2
3,925,692	-	asnA	b3744	0.52	-0.3
3,925,693	-	asnA	b3744	0.52	+0.6
3,925,789	+	asnA	b3744	0.62	-0.3
3,925,797	-	asnA	b3744	0.62	+0.3
3,925,808	-	asnA	b3744	0.63	-0.3
3,925,808	-	asnA	b3744	0.63	-0.5
3,925,823	+	asnA	b3744	0.65	+0.4
3,925,842	-	asnA	b3744	0.67	-0.0
3,925,845	-				+1.0
3,925,845	-	asnA	b3744	0.67	-0.2
3,925,848	+	asnA	b3744	0.67	+0.2
3,925,848	+	asnA	b3744	0.67	+0.1
3,925,848	+	asnA	b3744	0.67	+1.5
3,925,848	+	asnA	b3744	0.67	+0.0
3,925,853	+	asnA	b3744	0.68	+0.6
3,925,853	+	asnA	b3744	0.68	+0.6
3,925,860	+	asnA	b3744	0.69	+0.1
3,925,868	+	asnA	b3744	0.69	+0.3
3,925,868	+	asnA	b3744	0.69	+0.1
3,925,941	+	asnA	b3744	0.77	-0.3
3,925,954	-	asnA	b3744	0.78	-0.6
3,925,986	-	asnA	b3744	0.81	+0.1
3,926,000	+	asnA	b3744	0.83	-0.2
3,926,000	+	asnA	b3744	0.83	+0.3
3,926,000	+	asnA	b3744	0.83	+0.2
3,926,005	+	asnA	b3744	0.83	-0.7
3,926,010	+	asnA	b3744	0.84	-0.9
3,926,058	+	asnA	b3744	0.89	+0.2
3,926,076	+				-0.2
3,926,080	-				-0.2
3,926,080	-				-0.7
3,926,093	-				-0.5
3,926,125	+				+0.5
3,926,127	-				-0.7
3,926,133	-				-0.0
3,926,135	+				-1.0
3,926,135	+				+0.1
3,926,148	+				-0.1
3,926,148	+				+0.1
3,926,165	-				-0.1
3,926,165	-				+0.4
3,926,261	-				+0.5
3,926,295	+				-2.8
3,926,308	-				+0.1
3,926,308	-				+0.1
3,926,308	-				+0.4
3,926,398	+	yieM	b3745	0.15	+0.1
3,926,423	-	yieM	b3745	0.17	-0.0
3,926,496	+	yieM	b3745	0.22	-0.4
3,926,506	-	yieM	b3745	0.23	-0.2
3,926,513	+	yieM	b3745	0.23	-0.1
3,926,554	-	yieM	b3745	0.26	+0.6
3,926,583	+	yieM	b3745	0.28	-0.5
3,926,605	+	yieM	b3745	0.30	+0.1
3,926,613	-	yieM	b3745	0.30	-0.0
3,926,615	+	yieM	b3745	0.30	-0.5
3,926,656	+	yieM	b3745	0.33	+0.3
3,926,733	-	yieM	b3745	0.38	+0.0
3,926,735	-	yieM	b3745	0.39	+0.0
3,926,739	+	yieM	b3745	0.39	+0.3
3,926,752	-	yieM	b3745	0.40	+0.1
3,926,752	-	yieM	b3745	0.40	-0.2
3,926,752	-	yieM	b3745	0.40	-0.4
3,926,752	-	yieM	b3745	0.40	+0.1
3,926,752	-	yieM	b3745	0.40	+0.6
3,926,752	-	yieM	b3745	0.40	-0.0
3,926,752	-	yieM	b3745	0.40	+0.3
3,926,801	-	yieM	b3745	0.43	-0.3
3,926,807	+	yieM	b3745	0.44	-0.9
3,926,807	+	yieM	b3745	0.44	-0.1
3,926,839	-	yieM	b3745	0.46	-0.0
3,926,874	-	yieM	b3745	0.48	+0.6
3,926,874	-	yieM	b3745	0.48	+0.5
3,926,927	-	yieM	b3745	0.52	+0.2
3,926,942	+	yieM	b3745	0.53	-1.4
3,926,942	+	yieM	b3745	0.53	-0.0
3,927,009	+	yieM	b3745	0.57	+0.2
3,927,024	+	yieM	b3745	0.58	-0.6
3,927,024	+	yieM	b3745	0.58	-0.0
3,927,024	+	yieM	b3745	0.58	+0.5
3,927,070	+	yieM	b3745	0.62	-0.7
3,927,070	+	yieM	b3745	0.62	+0.9
3,927,071	+	yieM	b3745	0.62	-0.6
3,927,071	+	yieM	b3745	0.62	-0.1
3,927,104	-	yieM	b3745	0.64	-0.7
3,927,104	-	yieM	b3745	0.64	-0.4
3,927,129	+	yieM	b3745	0.66	-0.3
3,927,154	-	yieM	b3745	0.67	-0.3
3,927,157	+	yieM	b3745	0.68	-0.3
3,927,157	+	yieM	b3745	0.68	+0.2
3,927,159	+	yieM	b3745	0.68	-0.5
3,927,167	-	yieM	b3745	0.68	+0.8