Strain Fitness in Escherichia coli BW25113 around b2200

Experiment: Caprolactam 7 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Caprolactam 7 vol%
2,293,450	+	ccmD	b2198	0.24	+0.2
2,293,526	-	ccmD	b2198	0.60	+0.4
2,293,757	-	ccmC	b2199	0.21	-0.6
2,293,866	-	ccmC	b2199	0.35	+0.2
2,293,966	+	ccmC	b2199	0.49	+0.2
2,293,966	+	ccmC	b2199	0.49	-1.1
2,293,966	+	ccmC	b2199	0.49	+0.2
2,293,966	+	ccmC	b2199	0.49	+0.7
2,293,966	+	ccmC	b2199	0.49	-0.1
2,294,113	+	ccmC	b2199	0.69	-0.7
2,294,244	+	ccmC	b2199	0.87	+0.4
2,294,244	+	ccmC	b2199	0.87	-0.4
2,294,249	+	ccmC	b2199	0.87	-2.0
2,294,284	-				+0.6
2,294,342	-				-0.2
2,294,482	-	ccmB	b2200	0.15	-0.4
2,294,482	-	ccmB	b2200	0.15	+1.3
2,294,559	+	ccmB	b2200	0.26	+0.1
2,294,559	+	ccmB	b2200	0.26	+0.4
2,294,744	-	ccmB	b2200	0.54	+0.4
2,294,744	-	ccmB	b2200	0.54	-0.0
2,294,904	-	ccmB	b2200	0.78	+0.3
2,294,928	-	ccmB	b2200	0.82	+0.3
2,294,999	+				-0.4
2,295,133	+	ccmA	b2201	0.14	+0.7
2,295,133	+	ccmA	b2201	0.14	-0.3
2,295,152	+	ccmA	b2201	0.17	+0.3
2,295,207	+	ccmA	b2201	0.26	+0.1
2,295,207	+	ccmA	b2201	0.26	-0.2
2,295,285	+	ccmA	b2201	0.39	-0.1
2,295,401	+	ccmA	b2201	0.57	+0.1
2,295,433	-	ccmA	b2201	0.62	-0.5
2,295,476	+	ccmA	b2201	0.69	-1.3
2,295,476	+	ccmA	b2201	0.69	-0.0
2,295,516	-	ccmA	b2201	0.76	+0.2
2,295,575	-	ccmA	b2201	0.85	+0.1
2,295,650	+				-0.8
2,295,690	+				+0.4
2,295,722	-				+0.5
2,295,760	+	napC	b2202	0.13	+0.6
2,295,760	+	napC	b2202	0.13	-0.1
2,295,769	+	napC	b2202	0.15	+0.6
2,295,806	+	napC	b2202	0.21	+0.1
2,295,880	+	napC	b2202	0.33	+0.2
2,295,921	-	napC	b2202	0.40	-0.2