Strain Fitness in Escherichia coli BW25113 around b4408

Experiment: Isobutyl alcohol 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Isobutyl alcohol 1.25 vol%
2,921,209	-	yqcB	b2791	0.24	-0.6
2,921,317	+	yqcB	b2791	0.37	-0.6
2,921,351	+	yqcB	b2791	0.42	-0.1
2,921,504	+	yqcB	b2791	0.61	+0.6
2,921,504	+	yqcB	b2791	0.61	+0.2
2,921,547	-	yqcB	b2791	0.67	-0.3
2,921,631	-	yqcB	b2791	0.78	+0.1
2,921,637	-	yqcB	b2791	0.78	-0.0
2,921,637	-	yqcB	b2791	0.78	-0.5
2,921,710	-	yqcB	b2791	0.88	-0.2
2,921,710	-	yqcB	b2791	0.88	-0.9
2,921,785	-				+0.1
2,921,795	-				+0.4
2,921,795	-				+0.7
2,921,820	-				+0.0
2,921,882	+	yqcC	b2792	0.23	+0.1
2,921,980	-	yqcC	b2792	0.53	+0.2
2,921,980	-	yqcC	b2792	0.53	-1.0
2,921,992	+	yqcC	b2792	0.56	+0.4
2,922,015	-	yqcC	b2792	0.63	+0.6
2,922,118	-				+0.6
2,922,131	+				-1.0
2,922,194	+				+0.8
2,922,204	-				+0.5
2,922,317	-	csrB	b4408	0.38	-0.5
2,922,407	+	csrB	b4408	0.62	+3.2
2,922,407	+	csrB	b4408	0.62	+0.7
2,922,418	+	csrB	b4408	0.65	+1.2
2,922,443	-	csrB	b4408	0.72	-2.3
2,922,488	-	csrB	b4408	0.84	+0.3
2,922,501	-	csrB	b4408	0.88	+0.2
2,922,544	+				+0.1
2,922,573	+				+0.3
2,922,573	+				+0.5
2,922,686	-				-0.2
2,922,705	+				+0.4
2,922,705	+				+0.3
2,922,717	-				+0.2
2,922,717	-				+0.5
2,922,846	+	syd	b2793	0.16	+0.7
2,922,848	+	syd	b2793	0.17	-0.4
2,922,848	+	syd	b2793	0.17	+0.1
2,922,859	+	syd	b2793	0.19	-0.3
2,922,859	+	syd	b2793	0.19	-0.6
2,922,869	+	syd	b2793	0.21	+0.0
2,922,892	-	syd	b2793	0.25	-0.4
2,922,929	-	syd	b2793	0.32	+0.2
2,922,946	-	syd	b2793	0.35	-0.2
2,922,970	-	syd	b2793	0.39	-0.9
2,922,982	-	syd	b2793	0.41	-0.1
2,923,017	-	syd	b2793	0.48	+0.8
2,923,017	-	syd	b2793	0.48	+0.2
2,923,042	-	syd	b2793	0.52	-0.2
2,923,048	+	syd	b2793	0.53	-0.5
2,923,048	+	syd	b2793	0.53	-0.1
2,923,066	+	syd	b2793	0.57	-0.4
2,923,139	+	syd	b2793	0.70	-0.6
2,923,161	-	syd	b2793	0.74	+0.8
2,923,161	-	syd	b2793	0.74	+1.2
2,923,161	-	syd	b2793	0.74	-1.0
2,923,207	-	syd	b2793	0.82	-0.0
2,923,225	+	syd	b2793	0.86	-0.9
2,923,233	-	syd	b2793	0.87	-1.0
2,923,235	+	syd	b2793	0.88	-0.6
2,923,235	+	syd	b2793	0.88	-0.1
2,923,255	+				-0.4
2,923,301	+				-1.8
2,923,361	-				+0.8
2,923,361	-				-0.0
2,923,454	-				-0.3
2,923,460	-	yqcD	b2794	0.11	-0.3
2,923,537	-	yqcD	b2794	0.20	+0.1
2,923,537	-	yqcD	b2794	0.20	+0.3