Strain Fitness in Escherichia coli BW25113 around b2182
Experiment: Isobutyl alcohol 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Isobutyl alcohol 1.25 vol% |
---|---|---|---|---|---|
remove | |||||
2,275,673 | + | yejF | b2180 | 0.85 | -0.1 |
2,275,814 | - | +0.2 | |||
2,275,816 | - | +0.3 | |||
2,275,870 | + | +0.0 | |||
2,275,870 | + | -0.7 | |||
2,276,009 | + | yejG | b2181 | 0.27 | +0.0 |
2,276,027 | - | yejG | b2181 | 0.32 | -0.2 |
2,276,032 | + | yejG | b2181 | 0.34 | +0.7 |
2,276,032 | + | yejG | b2181 | 0.34 | -1.4 |
2,276,032 | + | yejG | b2181 | 0.34 | +2.7 |
2,276,032 | - | yejG | b2181 | 0.34 | +0.1 |
2,276,078 | + | yejG | b2181 | 0.47 | -0.4 |
2,276,099 | + | yejG | b2181 | 0.53 | -0.5 |
2,276,108 | - | yejG | b2181 | 0.56 | -0.3 |
2,276,245 | - | -0.3 | |||
2,276,332 | + | +0.5 | |||
2,276,374 | + | -0.9 | |||
2,276,406 | - | -0.9 | |||
2,276,411 | - | +0.5 | |||
2,276,411 | - | -1.1 | |||
2,276,429 | - | -0.6 | |||
2,276,885 | - | bcr | b2182 | 0.25 | +0.7 |
2,276,892 | - | bcr | b2182 | 0.25 | +0.6 |
2,276,892 | - | bcr | b2182 | 0.25 | +0.2 |
2,276,950 | - | bcr | b2182 | 0.30 | +1.7 |
2,276,950 | - | bcr | b2182 | 0.30 | +1.5 |
2,277,132 | + | bcr | b2182 | 0.45 | +0.7 |
2,277,137 | + | bcr | b2182 | 0.46 | +0.2 |
2,277,197 | + | bcr | b2182 | 0.51 | +0.1 |
2,277,287 | + | bcr | b2182 | 0.58 | +1.2 |
2,277,287 | + | bcr | b2182 | 0.58 | +0.2 |
2,277,352 | - | bcr | b2182 | 0.64 | -0.6 |
2,277,352 | - | bcr | b2182 | 0.64 | -0.9 |
2,277,352 | - | bcr | b2182 | 0.64 | +0.0 |
2,277,422 | - | bcr | b2182 | 0.70 | +1.0 |
2,277,445 | + | bcr | b2182 | 0.72 | -0.1 |
2,277,573 | + | bcr | b2182 | 0.82 | +0.1 |
2,277,625 | - | bcr | b2182 | 0.87 | -0.4 |
2,277,628 | - | bcr | b2182 | 0.87 | -0.1 |
2,277,641 | + | bcr | b2182 | 0.88 | +0.1 |
2,277,695 | + | +0.3 | |||
2,277,695 | + | -0.1 | |||
2,277,696 | + | +2.0 | |||
2,277,759 | + | -0.5 | |||
2,277,767 | + | +0.2 | |||
2,278,002 | - | rsuA | b2183 | 0.28 | +0.6 |
2,278,018 | - | rsuA | b2183 | 0.30 | -1.0 |
2,278,126 | - | rsuA | b2183 | 0.45 | -1.2 |
2,278,173 | + | rsuA | b2183 | 0.52 | +1.0 |
2,278,266 | - | rsuA | b2183 | 0.66 | -0.6 |
2,278,285 | - | rsuA | b2183 | 0.68 | +0.2 |
2,278,462 | - | -0.1 | |||
2,278,560 | - | +0.1 | |||
2,278,678 | - | +0.1 | |||
2,278,720 | + | -0.3 | |||
2,278,720 | + | +0.3 |
Or see this region's nucleotide sequence