Strain Fitness in Escherichia coli BW25113 around b2136
Experiment: Isobutyl alcohol 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Isobutyl alcohol 1.25 vol% |
---|---|---|---|---|---|
remove | |||||
2,222,976 | - | -0.6 | |||
2,223,193 | - | yohC | b2135 | 0.22 | -0.0 |
2,223,323 | - | yohC | b2135 | 0.44 | -0.2 |
2,223,457 | - | yohC | b2135 | 0.66 | -1.4 |
2,223,476 | - | yohC | b2135 | 0.70 | -0.1 |
2,223,531 | + | yohC | b2135 | 0.79 | -0.5 |
2,223,573 | - | yohC | b2135 | 0.86 | +0.1 |
2,223,647 | + | -0.3 | |||
2,223,831 | + | +0.1 | |||
2,223,879 | + | +0.5 | |||
2,224,007 | - | yohD | b2136 | 0.32 | +0.4 |
2,224,171 | - | yohD | b2136 | 0.60 | +0.8 |
2,224,249 | - | yohD | b2136 | 0.74 | +0.3 |
2,224,348 | - | -0.5 | |||
2,224,358 | + | -0.6 | |||
2,224,417 | - | -1.2 | |||
2,224,529 | - | -0.1 | |||
2,224,541 | - | +1.0 | |||
2,224,578 | + | -0.2 | |||
2,224,713 | - | yohF | b2137 | 0.24 | -0.4 |
2,224,872 | - | yohF | b2137 | 0.45 | -0.6 |
2,224,902 | + | yohF | b2137 | 0.49 | +1.1 |
2,224,902 | + | yohF | b2137 | 0.49 | -0.3 |
2,224,942 | + | yohF | b2137 | 0.54 | -0.3 |
2,224,992 | - | yohF | b2137 | 0.60 | -0.3 |
2,224,992 | - | yohF | b2137 | 0.60 | +0.3 |
2,224,994 | - | yohF | b2137 | 0.61 | +0.1 |
2,224,994 | - | yohF | b2137 | 0.61 | -0.5 |
2,225,063 | - | yohF | b2137 | 0.70 | +0.3 |
2,225,103 | - | yohF | b2137 | 0.75 | -0.7 |
2,225,133 | + | yohF | b2137 | 0.79 | +0.9 |
2,225,163 | + | yohF | b2137 | 0.83 | -0.0 |
2,225,199 | - | yohF | b2137 | 0.88 | +0.6 |
2,225,292 | - | +0.5 |
Or see this region's nucleotide sequence