Strain Fitness in Escherichia coli BW25113 around b1671
Experiment: Isobutyl alcohol 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Isobutyl alcohol 1.25 vol% |
---|---|---|---|---|---|
remove | |||||
1,747,895 | - | ydhU | b1670 | 0.39 | +0.2 |
1,747,958 | - | ydhU | b1670 | 0.47 | -0.9 |
1,747,958 | - | ydhU | b1670 | 0.47 | -0.4 |
1,747,965 | - | ydhU | b1670 | 0.48 | -0.1 |
1,748,076 | - | ydhU | b1670 | 0.62 | -0.5 |
1,748,231 | - | ydhU | b1670 | 0.82 | +0.3 |
1,748,231 | - | ydhU | b1670 | 0.82 | -0.5 |
1,748,764 | - | ydhX | b1671 | 0.59 | +0.7 |
1,748,764 | - | ydhX | b1671 | 0.59 | +0.3 |
1,748,847 | - | ydhX | b1671 | 0.71 | +0.3 |
1,749,057 | - | +1.0 | |||
1,749,057 | - | +0.2 | |||
1,749,123 | + | -0.1 | |||
1,749,144 | + | +0.7 | |||
1,749,151 | - | +0.2 | |||
1,749,425 | + | ydhW | b1672 | 0.50 | -0.2 |
1,749,504 | - | ydhW | b1672 | 0.62 | +0.1 |
1,749,504 | - | ydhW | b1672 | 0.62 | +0.8 |
1,749,504 | - | ydhW | b1672 | 0.62 | -0.2 |
1,749,607 | + | ydhW | b1672 | 0.78 | -0.4 |
1,749,666 | - | ydhW | b1672 | 0.87 | -0.1 |
1,749,802 | + | -1.9 | |||
1,749,802 | + | -0.2 |
Or see this region's nucleotide sequence