Strain Fitness in Escherichia coli BW25113 around b1661
Experiment: Isobutyl alcohol 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Isobutyl alcohol 1.25 vol% |
---|---|---|---|---|---|
remove | |||||
1,738,723 | - | ydhC | b1660 | 0.65 | +0.3 |
1,738,723 | - | ydhC | b1660 | 0.65 | -1.3 |
1,738,896 | - | ydhC | b1660 | 0.79 | -0.8 |
1,738,945 | - | ydhC | b1660 | 0.83 | +0.1 |
1,738,945 | - | ydhC | b1660 | 0.83 | -0.8 |
1,738,966 | - | ydhC | b1660 | 0.85 | -0.3 |
1,739,263 | + | +0.5 | |||
1,739,431 | - | +0.1 | |||
1,739,431 | - | +0.1 | |||
1,739,458 | - | +0.2 | |||
1,739,473 | - | +0.2 | |||
1,739,487 | + | +0.1 | |||
1,739,797 | + | cfa | b1661 | 0.31 | +0.1 |
1,740,198 | - | cfa | b1661 | 0.66 | +0.9 |
1,740,226 | - | cfa | b1661 | 0.69 | +0.9 |
1,740,389 | + | cfa | b1661 | 0.83 | +0.5 |
1,740,447 | + | cfa | b1661 | 0.88 | +0.8 |
1,740,447 | + | cfa | b1661 | 0.88 | +0.1 |
1,740,449 | + | cfa | b1661 | 0.88 | +0.1 |
1,740,449 | + | cfa | b1661 | 0.88 | +0.2 |
1,740,505 | - | -0.1 | |||
1,740,538 | + | -0.3 | |||
1,741,305 | + | -0.4 | |||
1,741,305 | + | +0.3 | |||
1,741,328 | - | -0.1 | |||
1,741,333 | - | -0.6 | |||
1,741,342 | + | -0.6 |
Or see this region's nucleotide sequence