Strain Fitness in Escherichia coli BW25113 around b1263
Experiment: Isobutyl alcohol 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Isobutyl alcohol 1.25 vol% |
---|---|---|---|---|---|
remove | |||||
1,317,035 | - | trpC | b1262 | 0.43 | -0.9 |
1,317,035 | - | trpC | b1262 | 0.43 | +1.0 |
1,317,113 | - | trpC | b1262 | 0.49 | -1.0 |
1,317,144 | - | trpC | b1262 | 0.51 | -0.5 |
1,317,153 | + | trpC | b1262 | 0.52 | +0.8 |
1,317,181 | + | trpC | b1262 | 0.54 | +0.5 |
1,317,305 | - | trpC | b1262 | 0.63 | -1.0 |
1,317,389 | + | trpC | b1262 | 0.69 | -0.5 |
1,317,389 | + | trpC | b1262 | 0.69 | -0.1 |
1,317,643 | + | trpC | b1262 | 0.88 | -0.1 |
1,317,684 | - | -0.0 | |||
1,317,684 | - | +0.6 | |||
1,317,766 | - | +0.4 | |||
1,318,316 | + | trpD | b1263 | 0.32 | +0.7 |
1,318,316 | + | trpD | b1263 | 0.32 | -0.2 |
1,319,016 | - | trpD | b1263 | 0.75 | +1.1 |
1,319,138 | - | trpD | b1263 | 0.83 | +0.7 |
1,319,228 | + | trpD | b1263 | 0.89 | -0.5 |
1,319,372 | - | +0.2 | |||
1,319,455 | - | +0.6 | |||
1,319,714 | + | trpE | b1264 | 0.20 | -0.7 |
1,319,820 | + | trpE | b1264 | 0.26 | +0.1 |
1,320,027 | + | trpE | b1264 | 0.40 | +0.8 |
1,320,044 | + | trpE | b1264 | 0.41 | +0.2 |
1,320,100 | - | trpE | b1264 | 0.44 | -0.7 |
1,320,119 | - | trpE | b1264 | 0.45 | +0.3 |
1,320,125 | + | trpE | b1264 | 0.46 | +0.3 |
1,320,125 | + | trpE | b1264 | 0.46 | +0.7 |
1,320,275 | - | trpE | b1264 | 0.55 | +0.4 |
1,320,275 | - | trpE | b1264 | 0.55 | +0.5 |
Or see this region's nucleotide sequence