Strain Fitness in Escherichia coli BW25113 around b1130
Experiment: Isobutyl alcohol 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Isobutyl alcohol 1.25 vol% |
---|---|---|---|---|---|
remove | |||||
1,188,100 | - | phoQ | b1129 | 0.38 | +3.0 |
1,188,191 | + | phoQ | b1129 | 0.45 | -0.6 |
1,188,246 | + | phoQ | b1129 | 0.48 | +0.0 |
1,188,320 | + | phoQ | b1129 | 0.53 | -1.6 |
1,188,342 | + | phoQ | b1129 | 0.55 | +1.0 |
1,188,342 | + | phoQ | b1129 | 0.55 | +1.0 |
1,188,435 | - | phoQ | b1129 | 0.61 | +1.0 |
1,188,435 | - | phoQ | b1129 | 0.61 | +0.0 |
1,188,461 | + | phoQ | b1129 | 0.63 | +1.0 |
1,188,564 | + | phoQ | b1129 | 0.70 | +1.0 |
1,188,760 | - | phoQ | b1129 | 0.84 | +1.0 |
1,188,760 | - | phoQ | b1129 | 0.84 | +0.0 |
1,188,911 | + | +2.3 | |||
1,188,924 | + | +1.0 | |||
1,189,023 | - | +1.4 | |||
1,189,104 | + | phoP | b1130 | 0.16 | +2.3 |
1,189,121 | + | phoP | b1130 | 0.18 | +1.0 |
1,189,135 | - | phoP | b1130 | 0.20 | +0.0 |
1,189,135 | - | phoP | b1130 | 0.20 | -1.0 |
1,189,137 | + | phoP | b1130 | 0.21 | +2.3 |
1,189,137 | + | phoP | b1130 | 0.21 | +1.6 |
1,189,137 | + | phoP | b1130 | 0.21 | +1.6 |
1,189,320 | - | phoP | b1130 | 0.48 | +0.4 |
1,189,320 | - | phoP | b1130 | 0.48 | +0.0 |
1,189,330 | - | phoP | b1130 | 0.49 | +1.6 |
1,189,375 | - | phoP | b1130 | 0.56 | +2.0 |
1,189,375 | - | phoP | b1130 | 0.56 | +1.0 |
1,189,395 | + | phoP | b1130 | 0.59 | +1.0 |
1,189,403 | - | phoP | b1130 | 0.60 | +1.0 |
1,189,483 | + | phoP | b1130 | 0.72 | +1.0 |
1,189,587 | + | phoP | b1130 | 0.88 | +2.0 |
1,189,587 | + | phoP | b1130 | 0.88 | +3.3 |
1,189,590 | + | phoP | b1130 | 0.88 | +1.0 |
1,189,614 | - | +1.0 | |||
1,189,713 | + | -0.6 |
Or see this region's nucleotide sequence